TCONS_00028745-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028745-protein
Unique NameTCONS_00028745-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length613

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028745-protein ID=TCONS_00028745-protein|Name=TCONS_00028745-protein|organism=Clytia hemisphaerica|type=polypeptide|length=613bp
MSSKESRVRKHEDHQEEESDSDDMIGPMPVPVKKKKKLEFEQTYLKNLPS
AETYEKSFMHRDSVTHVQVTKTDFIITASCDGHVKFWKKKESEIEFVKHF
RAHLGAIESCCVSSDGALYASAGVDKALKVFDVINFDMINMMKLDYQPST
CEWVFKKGDEISAIAIAEKEGNLINIYDGRGVNTPIHIVKLHTKPITCMR
YNPTFDVAVSCDHAGMVEYWSGQKKDFAFPKDVKFEYKTDTDLFEFVAAK
TIVTSLNFSPDGKQFVTVSPDRKIRLFRFLTGKKTRVFDENLKTFTAMQQ
EKQILPNMEFGRRMASERELEKSEAFNTVNPVFDESGYFILYSTMLGIKV
INIFSNTCVKILGKKENVRFLNIALYQGNPNRPTAAITMEMRASDNPSLE
KLSTDPTVVCTGFKKNRFYLFSRREPDQDQTDRDVFNEKPSREEIVAATQ
EASAKVLAEKLVMHTSMGDIHFKLFPKECPKTVENFVTHCRNGYYNGHIF
HRIIKQFMLQTGDPLGDGTGGESIWGGEFEDEFHHTLRHDRPYTLSMANA
GPNTNGSQFFITVVPTPWLDNKHTVFGRVVKGMDICQQMSMVKTNSRDDK
PYDEIKIINMLVK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016307XLOC_016307Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028745TCONS_00028745Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR029000Cyclophilin-like_dom
IPR017986WD40_repeat_dom
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPRINTSPR00153CSAPPISMRASEcoord: 500..512
score: 65.71
coord: 571..586
score: 52.57
coord: 543..558
score: 77.71
coord: 474..489
score: 47.72
coord: 558..570
score: 67.2
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 462..610
e-value: 6.0E-52
score: 176.0
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 457..612
score: 35.554
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 239..278
e-value: 2.1E-4
score: 30.6
coord: 93..132
e-value: 1.1E-4
score: 31.6
coord: 51..88
e-value: 0.0012
score: 28.1
coord: 182..221
e-value: 0.014
score: 24.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 96..132
e-value: 0.002
score: 18.8
coord: 251..277
e-value: 0.19
score: 12.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 246..287
score: 9.305
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 3..425
e-value: 4.0E-34
score: 117.4
IPR029000Cyclophilin-like domainGENE3D2.40.100.10coord: 438..613
e-value: 4.2E-72
score: 240.9
IPR029000Cyclophilin-like domainSUPERFAMILY50891Cyclophilin-likecoord: 455..612
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableCDDcd01927cyclophilin_WD40coord: 462..610
e-value: 2.02983E-100
score: 303.614
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 57..287
score: 13.976
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 323..362
coord: 54..292

Blast
[Close]
BLAST of TCONS_00028745-protein vs. Swiss-Prot (Human)
Match: PPWD1 (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Homo sapiens GN=PPWD1 PE=1 SV=1)

HSP 1 Score: 835.484 bits (2157), Expect = 0.000e+0
Identity = 390/620 (62.90%), Postives = 480/620 (77.42%), Query Frame = 0 
Query:    1 MSSKESRVRKHEDHQEEESDSDDMIGPMPVPV---KKKKKLEFEQTYLKNLPSAETYEKSFMHRDSVTHVQVTKTDFIITASCDGHVKFWKKKESEIEFVKHFRAHLGAIESCCVSSDGALYASAGVDKALKVFDVINFDMINMMKLDYQPSTCEWVFKKGDEISAIAIAEKEGNLINIYDGRGVNTPIHIV-KLHTKPITCMRYNPTFDVAVSCDHAGMVEYWSGQKKDFAFPKDVKFEYKTDTDLFEFVAAKTIVTSLNFSPDGKQFVTVSPDRKIRLFRFLTGKKTRVFDENLKTFTAMQQEKQILPNMEFGRRMASERELEKSEAFNTVNPVFDESGYFILYSTMLGIKVINIFSNTCVKILGKKENVRFLNIALYQGNPNRPTAAITMEMRASDNPSLEKLSTDPTVVCTGFKKNRFYLFSRREPDQDQ---TDRDVFNEKPSREEIVAATQEASAKVLAEKLVMHTSMGDIHFKLFPKECPKTVENFVTHCRNGYYNGHIFHRIIKQFMLQTGDPLGDGTGGESIWGGEFEDEFHHTLRHDRPYTLSMANAGPNTNGSQFFITVVPTPWLDNKHTVFGRVVKGMDICQQMSMVKTNSRDDKPYDEIKIINMLVK 613
            +S +E  V      + +E + +  +GP+PV     KK+K LEFE+ YL NLPSA  YE+S+MHRD +THV  TKTDFIITAS DGHVKFWKK E  IEFVKHFR+HLG IES  VSS+GAL+ S G DKA+KVFDV+NFDMINM+KL Y P  CEW++  GD IS++A +EK    I IYDGRG N P+HI  KLHT P+T +R NP +   VS D +GM+EYW+G   ++ FPK+V +EYKTDTDL+EF   K   TS+ FSPDGK+  T+  DRK+R+FRF+TGK  RVFDE+L  FT +QQ +Q LP+MEFGRRMA ERELEK +A   +N VFDE+G+F+LY TMLGIKVIN+ +N CV+ILGK+EN+R + +AL+QG   +  AA T+EM+AS+NP L+ +  DPT+VCT FKKNRFY+F++REP+  +   +DRDVFNEKPS+EE++AATQ    K +++  ++HTSMGDIH KLFP ECPKTVENF  H RNGYYNGH FHRIIK FM+QTGDP G G GGESIWGGEFEDEFH TLRHDRPYTLSMANAG NTNGSQFFITVVPTPWLDNKHTVFGRV KGM++ Q++S VK N + DKPY+++ IIN+ VK
Sbjct:   27 LSERELAVAVAVSQENDEENEERWVGPLPVEATLAKKRKVLEFERVYLDNLPSASMYERSYMHRDVITHVVCTKTDFIITASHDGHVKFWKKIEEGIEFVKHFRSHLGVIESIAVSSEGALFCSVGDDKAMKVFDVVNFDMINMLKLGYFPGQCEWIYCPGDAISSVAASEKSTGKIFIYDGRGDNQPLHIFDKLHTSPLTQIRLNPVYKAVVSSDKSGMIEYWTGPPHEYKFPKNVNWEYKTDTDLYEFAKCKAYPTSVCFSPDGKKIATIGSDRKVRIFRFVTGKLMRVFDESLSMFTELQQMRQQLPDMEFGRRMAVERELEKVDAVRLINIVFDETGHFVLYGTMLGIKVINVETNRCVRILGKQENIRVMQLALFQGIAKKHRAATTIEMKASENPVLQNIQADPTIVCTSFKKNRFYMFTKREPEDTKSADSDRDVFNEKPSKEEVMAATQAEGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITVK 646
The following BLAST results are available for this feature:
BLAST of TCONS_00028745-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPWD10.000e+062.90Peptidylprolyl isomerase domain and WD repeat-cont... [more]
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