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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00028923-protein ID=TCONS_00028923-protein|Name=TCONS_00028923-protein|organism=Clytia hemisphaerica|type=polypeptide|length=746bp
GGGDGDDDDDNDDDDNKKGPSKKDIASYPTMHIAGRSIVLEAVVKDQFHM
RKINDTGHNRICRKILNMSQRNAILNPAKKKIITGPFGCGKSVIVRQAIK
IFAKKEEDIVYYIGWNEYTLSHVDMETYCKELGLTNLKCVNIADLSRKHN
ANGEIMSLVNCLELLRQENQGTRVHVVIDEFDGEKFKPHQSPESEQQPKN
ELLQVITSQFFKESFFLISLQSCLKERDLVSNNEEPKELSRDCFKDIPEE
DMLRLNLPKTMRYTSKIRKVVKFILDEGTNETSYNLSDLQNKPTPESAQN
ESGISGDAANFLPIQAKEDRNTITSSSFIRRKHGFGTSKTDLDAYFEDYG
ITTNPSNEKIHNHFNYPKNLGDGTGMKSTTPVLLRLDTLSDKTDCLKLAH
LMQSMLFKEDKTPKSVFSNLMVVCNSKKIVRWIRWAFYMLKVEHEEYLDY
IYRRPSRSIEEKRQLVEGWKTRVLLADCMGCRGLEAKEVVVVWEESDYHN
RHLLGEALSRARSKLYMVTVKADDRQQKTDLSNVIDKLMSKCPKSIIKVV
KGDVLEIANDKRHFGYELRDTARDGIVTIDGTKYDFDDVWKILLEKKFAK
FEEIFRQKPNIVNSLRDGDLGWTLLMMAVRVDRFDVFVHLMDYPQDFSLV
DVLGRNVLHFVGSNEKVRYLEQFDQQTIKKLIDGRDEWNNETPLHRAARC
NKHDVIEWLLANGADHELKDILGRRPDEHGDCDGVTKEIFRSFRSS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 620..649
e-value: 26.0
score: 13.7
coord: 689..718
e-value: 0.0013
score: 28.0 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 689..721
score: 12.102 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 57..271
e-value: 3.0E-4
score: 20.1 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 272..547
e-value: 2.3E-5
score: 23.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..26 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 621..726
e-value: 1.71978E-12
score: 64.327 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 581..727
e-value: 1.9E-16
score: 59.4 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 625..720
e-value: 4.8E-8
score: 33.4 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 620..726
score: 15.671 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 616..726 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 135..192
coord: 236..284
coord: 394..524
coord: 66..104 |
Blast
The following BLAST results are available for this feature:
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