TCONS_00043696-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00043696-protein
Unique Name	TCONS_00043696-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	138

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00043696-protein ID=TCONS_00043696-protein|Name=TCONS_00043696-protein|organism=Clytia hemisphaerica|type=polypeptide|length=138bp
MRLNADMITVYEFQSAPALLQIQTIETLQSMLGNVTSVLQSLTSVKMQNL
YLIKSSPRYVDRISESMEQKLRVSEKLLSQITSLRERSQEAVKTQADTEP
KLALIVKKTKELQSQVESEISSRYKDRKVNIMGEINTI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_027380	XLOC_027380	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00043696	TCONS_00043696	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008491	DUF773

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008491	Protein of unknown function DUF773	PFAM	PF05600	DUF773	coord: 6..133 e-value: 1.5E-37 score: 129.4

Blast

[Close]

BLAST of TCONS_00043696-protein vs. Swiss-Prot (Human)
Match: CK5P3 (CDK5 regulatory subunit-associated protein 3 OS=Homo sapiens GN=CDK5RAP3 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 6.035e-32
Identity = 59/129 (45.74%), Postives = 96/129 (74.42%), Query Frame = 0

Query:    5 ADMITVYEFQSAPALLQIQTIETLQSMLGNVTSVLQSLTSVKMQNLYLIKSSPRYVDRISESMEQKLRVSEKLLSQITSLRERSQEAVKTQADTEPKLALIVKKTKELQSQVESEISSRYKDRKVNIMG 133
            AD+++V +FQ APA+LQ QT E + +M+  +  ++  LTS+++Q+L++I +SPRYVDR++E ++QKL+ S+ L  +   + ++ QEA++ QA  EPKL L+++KTKELQ  +E++IS RY  R VN+MG
Sbjct:  375 ADVLSVSQFQLAPAILQGQTKEKMVTMVSVLEDLIGKLTSLQLQHLFMILASPRYVDRVTEFLQQKLKQSQLLALKKELMVQKQQEALEEQAALEPKLDLLLEKTKELQKLIEADISKRYSGRPVNLMG 503

The following BLAST results are available for this feature:

BLAST of TCONS_00043696-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00043696-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CK5P3	6.035e-32	45.74	CDK5 regulatory subunit-associated protein 3 OS=Ho...	[more]

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TCONS_00043696-protein (polypeptide) - C. hemisphaerica