TCONS_00044651-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00044651-protein
Unique Name	TCONS_00044651-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	142

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00044651-protein ID=TCONS_00044651-protein|Name=TCONS_00044651-protein|organism=Clytia hemisphaerica|type=polypeptide|length=142bp
MSSTANHERERSVLSIKDLLEHYLKMANFNNEMHFSTLGYILGRLLPRCT
DPMTDVRQTTMECVQLLLTINDRYEGVPSNVSDERIQGLTQLRDALSKSD
PAALFNVVNELSLVVSKKTPDEQLKTLVFSLTDGLNDAHAQS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_028267	XLOC_028267	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00044651	TCONS_00044651	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..142 e-value: 1.3E-5 score: 23.5

Blast

[Close]

BLAST of TCONS_00044651-protein vs. Swiss-Prot (Human)
Match: MROH1 (Maestro heat-like repeat-containing protein family member 1 OS=Homo sapiens GN=MROH1 PE=2 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 7.018e-19
Identity = 42/137 (30.66%), Postives = 72/137 (52.55%), Query Frame = 0

Query:    1 MSSTANHERERSVLSIKDLLEHYLKMANFNNEMHFSTLGYILGRLLPRCTDPMTDVRQTTMECVQLLLTINDRYEGVPSNVSDERIQGLTQLRDALSKSDPAALFNVVNELSLVVSKKTPDEQLKTLVFSLTDGLND 137
            + S   HER R++     LL ++L+    +  + F  LG ++G   PRC D     RQ  ++CV  LL +   YEG   +  D+  + L  L+D L   DPA LF+  + +  +++K+ P +QL +L+ ++ + L D
Sbjct:  928 IKSPRGHERARALGLSALLLRYFLEHLRVSALVPFHNLGLLIGLFSPRCADLWPATRQEAVDCVYSLLYLQLGYEGFSRDYRDDVAERLLSLKDGLVHPDPAILFHTCHSVGQIIAKRLPPDQLISLLLTMFEALGD 1064

The following BLAST results are available for this feature:

BLAST of TCONS_00044651-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00044651-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MROH1	7.018e-19	30.66	Maestro heat-like repeat-containing protein family...	[more]

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TCONS_00044651-protein (polypeptide) - C. hemisphaerica