TCONS_00045060-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045060-protein
Unique NameTCONS_00045060-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length326

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045060-protein ID=TCONS_00045060-protein|Name=TCONS_00045060-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
GYIDHAAFLGTINPDTNKIPKHLFQGYLNIYNNYFKAPWMPDRTEANPNE
LNQDDARYGFRCCHLKNIWTAPLPPETELSRQMTTSTTSIDIMGLQAAYA
NLHTDQERDYFMQRYHDVISSFGGKTSYDADNRPLLVMRSNLWASGYDVD
GTDQTSLGQFSGRVQQTYKHSVPRFFVPEHGTMFTLALVRFPPTATKEIQ
YLNAKGALTYTDIAGDPVLYGNLPPREISMKDVFRSGDSSKKFKIAEGQW
YRYAPSYVSPAYHLLEGFPFIQEPPSGDLQERVLIRHHDYDQCFQSVQLL
QWNSQVKFNVTVYRNLPTTRDSIMTS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028644XLOC_028644Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045060TCONS_00045060Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003514Microviridae_protein_F
IPR016184Capsid/spike_ssDNA_virus
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
Vocabulary: Cellular Component
TermDefinition
GO:0019028viral capsid
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0019028 viral capsid
molecular_function GO:0005198 structural molecule activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003514Microviridae F proteinPFAMPF02305Phage_Fcoord: 86..324
e-value: 3.0E-89
score: 300.0
IPR003514Microviridae F proteinGENE3D2.60.169.10coord: 2..326
e-value: 1.3E-111
score: 373.1
IPR016184Capsid/spike protein, ssDNA virusSUPERFAMILY88645ssDNA virusescoord: 1..326

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045060-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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