TCONS_00045185-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045185-protein
Unique NameTCONS_00045185-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length221

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045185-protein ID=TCONS_00045185-protein|Name=TCONS_00045185-protein|organism=Clytia hemisphaerica|type=polypeptide|length=221bp
MASAAKKVINMNNISKMVAADDDIIYYANEAFKGTDGKLTFSKGQEVEVV
EKSPNGWWFVKVGKEEGWVPSHIVQRHRGHDIIDDKDLVDGQKYKTLGGY
KATEETGISFEPGQIVEVLEKDPAGWWFVKIGDEEGWAPSTFLGEIAEEG
GTPAPAPQQQQEEAGDSYITLSDYKDPDEGMLSFKKGQKVFVLEKDDGGW
WLAKCGTQEGWVPSNFLKKEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028768XLOC_028768Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045185TCONS_00045185Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 208..220
score: 33.4
coord: 197..206
score: 34.44
coord: 180..195
score: 35.82
IPR001452SH3 domainSMARTSM00326SH3_2coord: 166..221
e-value: 6.9E-17
score: 72.1
coord: 92..147
e-value: 6.7E-13
score: 58.9
coord: 24..78
e-value: 1.3E-9
score: 48.0
IPR001452SH3 domainPFAMPF00018SH3_1coord: 170..214
e-value: 9.6E-14
score: 50.6
coord: 100..140
e-value: 5.0E-10
score: 38.7
coord: 36..71
e-value: 1.2E-9
score: 37.5
IPR001452SH3 domainPROSITEPS50002SH3coord: 163..221
score: 15.12
IPR001452SH3 domainPROSITEPS50002SH3coord: 89..148
score: 12.385
IPR001452SH3 domainPROSITEPS50002SH3coord: 27..79
score: 11.157
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 24..79
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 157..219
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 89..149
NoneNo IPR availableGENE3D2.30.30.40coord: 118..165
e-value: 7.3E-13
score: 47.4
NoneNo IPR availableGENE3D2.30.30.40coord: 166..219
e-value: 2.0E-19
score: 68.6
NoneNo IPR availableGENE3D2.30.30.40coord: 73..117
e-value: 2.7E-11
score: 42.6
NoneNo IPR availableGENE3D2.30.30.40coord: 15..72
e-value: 7.9E-13
score: 47.3
NoneNo IPR availableCDDcd11856SH3_p47phox_likecoord: 93..143
e-value: 2.10604E-18
score: 74.9803
NoneNo IPR availableCDDcd11856SH3_p47phox_likecoord: 25..71
e-value: 3.14497E-15
score: 66.1207
NoneNo IPR availableCDDcd11856SH3_p47phox_likecoord: 167..219
e-value: 7.0186E-19
score: 76.1359

Blast
[Close]
BLAST of TCONS_00045185-protein vs. Swiss-Prot (Human)
Match: SPD2B (SH3 and PX domain-containing protein 2B OS=Homo sapiens GN=SH3PXD2B PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 1.306e-17
Identity = 48/148 (32.43%), Postives = 78/148 (52.70%), Query Frame = 0 
Query:   72 HIVQRHRGHDIIDDKDLVDGQKYKTLGGYKATEETGISFEPGQIVEVLEKDPAGWWFVKIGDEEGWAPSTFLGEIAEEGGTPAPAPQQQQEEAGDSYITLSDYKDPDEGMLSFKKGQKVFVLEKDDGGWWLAKCGTQEGWVPSNFLKK 219
            HI ++  G D      +V  Q Y  +  Y+  E + IS   GQ+V+++EK+ +GWWFV   +E+GW P+T L     EG          Q E  + Y  +  Y   D+  ++ ++G  V V++K+  GWW  +   +EGW P+++LKK
Sbjct:  136 HIGKKKSGGDQTSVDPMVLEQ-YVVVANYQKQESSEISLSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCL-----EGQDGVQDEFSLQPEEEEKYTVIYPYTARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLKK 277

HSP 2 Score: 80.4925 bits (197), Expect = 1.721e-17
Identity = 39/114 (34.21%), Postives = 72/114 (63.16%), Query Frame = 0 
Query:   33 KGTDGKLTFSKGQEVEVVEKSPNGWWFVKVGKEEGWVPSHIVQRHRGHDIIDDKDLV---DGQKYKTLGGYKATEETGISFEPGQIVEVLEKDPAGWWFVKIGDEEGWAPSTFL 143
            K    +++ S GQ V+++EK+ +GWWFV   +E+GWVP+  ++   G D + D+  +   + +KY  +  Y A ++  ++ E G +VEV++K+  GWW ++   +EGWAP+++L
Sbjct:  165 KQESSEISLSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLE---GQDGVQDEFSLQPEEEEKYTVIYPYTARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 275
The following BLAST results are available for this feature:
BLAST of TCONS_00045185-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPD2B1.306e-1732.43SH3 and PX domain-containing protein 2B OS=Homo sa... [more]
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