TCONS_00046167-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046167-protein
Unique NameTCONS_00046167-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length641

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046167-protein ID=TCONS_00046167-protein|Name=TCONS_00046167-protein|organism=Clytia hemisphaerica|type=polypeptide|length=641bp
MFSKSKRFVDEGSCAPPVGLYSVPDQKSVKLAGFEKSARWLDKIPDTPAK
KEDVTDASILSNHSLNNKSFNPMFVSSVKKKKPPTSKKPTSIKKDVSDPV
RKSLEVDVEFQQSKVNALLEKIKSLEIQLKGTQDHSDDLEKSNEKLHELL
GGMRNENAVLLQSQQAVEESRKMLEVEKTKAIKDLDAEIEQSARKLEELK
STHENEKTALNGKLQASQDINVDFRIQLESVESMMTDNLRDLSQKYENLE
ETLGNVQSDYKMKLQRSNSLVEKIKQANENSKHDLEVMHDVYNNLKHDYE
YCQNQLIEMDTKSKEKESDLMQKIENLQGKVDELTGNLDQTTNLLNEEKD
KSLILSEEFNRSQSLLKCSQQQTEDKINECLRLTEELEEINLKLNTLTED
KKVLRENLDCTKRDIQSMHQQHEQNQKEYQSQIVTLESAKSNMTNDLEKL
RTEYERSEMDLKKESELSKTLKLTFQEEIERLNSELDQSAQELKDLKETK
ESGISQPQFEEMQKELESWKMKYEELETRVGPFMSQLEQFEFEKQALLSE
NAFTQHEMNKLSEKYAQILGHQNNKQKIHHIRKLKEENLTLKNDAMKLRA
ENTRLKRNHIENREKKFDQSKAFQGKENRNANKQPLKPCNF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029490XLOC_029490Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046167TCONS_00046167Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031794HMMR_C
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 544..564
NoneNo IPR availableCOILSCoilCoilcoord: 317..351
NoneNo IPR availableCOILSCoilCoilcoord: 380..467
NoneNo IPR availableCOILSCoilCoilcoord: 232..259
NoneNo IPR availableCOILSCoilCoilcoord: 581..608
NoneNo IPR availableCOILSCoilCoilcoord: 182..213
NoneNo IPR availableCOILSCoilCoilcoord: 509..529
NoneNo IPR availableCOILSCoilCoilcoord: 472..499
NoneNo IPR availableCOILSCoilCoilcoord: 101..142
NoneNo IPR availableGENE3D1.20.1170.10coord: 90..355
e-value: 2.3E-7
score: 29.5
coord: 356..621
e-value: 4.4E-7
score: 28.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 604..641
IPR031794Hyaluronan-mediated motility receptor, C-terminalPFAMPF15908HMMR_Ccoord: 502..637
e-value: 2.6E-34
score: 118.7

Blast
[Close]
BLAST of TCONS_00046167-protein vs. Swiss-Prot (Human)
Match: HMMR (Hyaluronan mediated motility receptor OS=Homo sapiens GN=HMMR PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 3.382e-25
Identity = 82/231 (35.50%), Postives = 130/231 (56.28%), Query Frame = 0 
Query:  425 NQKEYQSQIVTLESAKSNMTNDLEKLRTEYERSEMDLKKESELSKT----LKLTFQEEIERLNSELDQSAQELKDLKETKESGISQPQ--FEEMQKELESWKMKYEELETRVGPFMSQLEQFEFEKQALLSENAFTQHEMNKLSEKYAQILGHQNNKQKIHHIRKLKEENLTLKNDAMKLRAENTRLKRNHIENRE--------KKFDQSKAFQGKENRN-ANKQPLKPCN 640
            N ++ Q QI+  ES+             EY R  +DL+ +S L +T    + ++F ++I  L ++L Q  ++ +   E +E   ++ +    E+ +E+  W++ YEEL  +  PF  QL+ FE EKQALL+E+   Q ++NK+ + YA++LGHQN KQKI H+ KLK+EN  LK++  KLR +  + K++  + +E        K FD SKAF  +   N A K PLK  N
Sbjct:  490 NAEDVQHQILATESSNQ-----------EYVRMLLDLQTKSALKETEIKEITVSFLQKITDLQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDAFEVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLRCQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGN 709
The following BLAST results are available for this feature:
BLAST of TCONS_00046167-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMMR3.382e-2535.50Hyaluronan mediated motility receptor OS=Homo sapi... [more]
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