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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00046819-protein ID=TCONS_00046819-protein|Name=TCONS_00046819-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1468bp
MGKEYELINAVREGNVQYVRKAHHKFKRSSKKSSSKKSTINVADTEGFTA
LHHAALLGDVEIIMSIIEMEGDVNTRDKKGMTPLHMAAWAGKDQAIKALL
ESRALPNLPSLAGETALHLASQHGYAACAKVLLVSHADGTFRNSALETPL
DLACQYGHTGVIKQLLQNELVIQSLVSPSTDPRYKSPLHLAAKGGHDDIV
KLLLNAGANVNECRTEGTALHLAGLYGKKEVVRLLIVSGINISLKNKEGM
TALDVVTQFTASRAGLEIKQMLREAAGESLVYACAVSDYNNKYDETCLSF
QSGDSIAVLEQNEDGRWRGYVVNSENEKMGYFPAMAVHLLSSPSKSTKAM
SVSSMASSNSSESTSRTAQTPNMSPERKNTTNEPASPATTPVGIVPIGNF
EVLTLSQGDQEFNQPPKQTAAGSLPPRMSSFKQKRQDGNGPLKSPRSPTK
SPRKSPSHKYPAPPPPPERSLSHDGQQSHVNGRETHRSFSEETPPSSHRF
EGERPPQRAMTINPQMMGGRNVPRQRTSSGGQEGVKENEDSRGRTQSAGR
DFSKALKMAIGSRVEREKQTSKQHNAPVSPNQLQQNSGGANYAEIEFAIA
DKSSPTIRSPRIDDNQNDKDAKGEYTTVYFSDESDRGRVDSSNQKQTFNN
RDALNSQTSYHGNIEVETKSSIQQNNTRNSLRTKNDEQPNYEPMELKQRT
DSYKFRPIVPGYEDMNTEFSSANTSHSTPPPELPSKGPQLPMKRANTLPT
HRQQTNDQRQSDIPRFQPPPPPTSSTSLKSRERSVYENSEIKTFGTPRTK
STGSAGSISPSARSPNRLPNAFPVLLQTPNSPNGRTSPSDLRASKTEQEV
FDWLTELKLACYFDSFKKHGFDMASMQAITPDDLNFLEIHKTGHRKKLLS
EIARLSFSERLPNNKPRDVGTWLGLLNLRQYEPNFVEGGFDDMDFIKDLD
KNDLEMIDIKKRGHQKKLLLAVQRLNDLELTAVLDIAVLESPTKRAHSFR
KTRENSNKSSTPEPSPLPTQITEDSNVFTFPAPPQTDSHNHQQQTSRDSH
TEQSTLHLRNSYLDQEPDIAVVETVTQNQNSFTEATHFQENTISKSINYQ
QQSSYTDDSDMSTAALSPRAPPPLASKPAKPAPTPKPKPAVPPPVAARKP
SVGPSVKPKPKPPVKPPQEQAVPSSPASKVTSGEMQGSQEEVVRSSKSRD
FFKQVEKKVLDDNNSPTNSLERRRSSSSSASWNDRRSSHSSTGSISPTGT
IIKKKPVPAPTPKPKPVVEEKPQPLPPQPHVDPLYPPAMLAAQAPPVAAK
KAPPPAPPKRINSQISENVVLPGVSPASSQPEINAKPVATVAPQPPPPEE
EICFSPPMPAFIPPPPPTEEFVPEPLDDLPPPPSPLDLPAPPPEVLMAPD
EIEPPKEVETPAAPVVQQTTTTTTTATTGTVVNDDINDIDKAFKNTDDIM
SNLLADLDDFSSQIDDMF Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002110 | Ankyrin repeat | PRINTS | PR01415 | ANKYRIN | coord: 47..62
score: 45.32
coord: 199..213
score: 44.12 |
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 46..75
e-value: 0.1
score: 21.7
coord: 145..174
e-value: 2.6
score: 17.0
coord: 112..143
e-value: 10.0
score: 15.1
coord: 183..212
e-value: 4.9E-7
score: 39.4
coord: 215..244
e-value: 8.8
score: 15.3
coord: 79..108
e-value: 0.0033
score: 26.7 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 112..144
score: 9.805 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 46..78
score: 11.915 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 215..247
score: 11.14 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 183..215
score: 13.357 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 79..111
score: 10.259 |
| IPR001660 | Sterile alpha motif domain | SMART | SM00454 | SAM_4 | coord: 842..908
e-value: 1.2E-11
score: 54.7
coord: 911..978
e-value: 3.9E-14
score: 62.9 |
| IPR001660 | Sterile alpha motif domain | PFAM | PF00536 | SAM_1 | coord: 845..905
e-value: 4.2E-13
score: 49.4
coord: 914..975
e-value: 6.4E-14
score: 52.0 |
| IPR001660 | Sterile alpha motif domain | PROSITE | PS50105 | SAM_DOMAIN | coord: 845..908
score: 13.373 |
| IPR001660 | Sterile alpha motif domain | PROSITE | PS50105 | SAM_DOMAIN | coord: 914..978
score: 14.628 |
| IPR001452 | SH3 domain | SMART | SM00326 | SH3_2 | coord: 281..341
e-value: 0.0011
score: 28.3 |
| IPR001452 | SH3 domain | PROSITE | PS50002 | SH3 | coord: 278..342
score: 10.453 |
| IPR001452 | SH3 domain | SUPERFAMILY | 50044 | SH3-domain | coord: 267..368 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 112..168
e-value: 8.9E-7
score: 29.3
coord: 9..107
e-value: 3.2E-9
score: 37.2
coord: 171..246
e-value: 8.9E-12
score: 45.3 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 2..156
e-value: 1.4E-38
score: 131.7 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 157..272
e-value: 2.6E-27
score: 95.0 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 38..253
score: 51.966 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 7..258 |
| None | No IPR available | GENE3D | 1.10.150.50 | | coord: 842..905
e-value: 5.7E-16
score: 58.0
coord: 912..975
e-value: 4.7E-17
score: 61.5 |
| None | No IPR available | GENE3D | 2.30.30.40 | | coord: 273..307
e-value: 1.6E-4
score: 20.7 |
| None | No IPR available | GENE3D | 2.30.30.40 | | coord: 308..709
e-value: 1.7E-8
score: 33.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1409..1428 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1101..1286 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 350..393 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1322..1399 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 410..843 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 994..1054 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 41..166
e-value: 7.29057E-35
score: 130.581 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 113..236
e-value: 2.29251E-30
score: 117.485 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 179..298
e-value: 2.46276E-22
score: 94.3726 |
| IPR011511 | Variant SH3 domain | PFAM | PF07653 | SH3_2 | coord: 285..337
e-value: 1.6E-5
score: 24.4 |
| IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 909..977 |
| IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 846..906 |
Blast
BLAST of TCONS_00046819-protein vs. Swiss-Prot (Human)
Match: CSKI1 (Caskin-1 OS=Homo sapiens GN=CASKIN1 PE=1 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 6.013e-82 Identity = 154/342 (45.03%), Postives = 223/342 (65.20%), Query Frame = 0
Query: 1 MGKEYELINAVREGNVQYVRKAHHKFKRSSKK--SSSKKSTINVADTEGFTALHHAALLGDVEIIMSIIEMEGDVNTRDKKGMTPLHMAAWAGKDQAIKALLESRALPNLPSLAGETALHLASQHGYAACAKVLLVSHADGTFRNSALETPLDLACQYGHTGVIKQLLQNELVIQSLVSP----STDPRYKSPLHLAAKGGHDDIVKLLLNAGANVNECRTEGTALHLAGLYGKKEVVRLLIVSGINISLKNKEGMTALDVVTQFTASRAGLEIKQMLREAAGESLVYACAVSDYNNKYDETCLSFQSGDSIAVLEQNEDGRWRGYVVNSE--NEKMGYFPA 334
MGKE EL+ AV+ +V ++ + + K S+KK +N D +GF+ALHHAAL G+ E+I ++E + V+ +D KGM PLH AAW G+ + +K +L++ + N+PS G LHLA+QHG+ +++LL ++ +++ +TPLDLAC++G GV++ LL + + +L+ P +TDP SPLHLAAK GH DI++LLL AG ++N GTALH A L GK EVVRLL+ SGIN ++N TALD+V QFT S+A EIKQ+LREA+ V A DY N YD T L+ ++GD I VLEQ+ DGRW+G + ++ N+++GYFP+
Sbjct: 1 MGKEQELVQAVKAEDVGTAQRLLQRPRPGKAKLLGSTKKINVNFQDPDGFSALHHAALNGNTELISLLLEAQAAVDIKDNKGMRPLHYAAWQGRKEPMKLVLKAGSAVNIPSDEGHIPLHLAAQHGHYDVSEMLLQHQSNPCMVDNSGKTPLDLACEFGRVGVVQLLLSSNMCA-ALLEPRPGDATDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKSGTALHEAALCGKTEVVRLLLDSGINAHVRNTYSQTALDIVHQFTTSQASREIKQLLREASAALQVR--ATKDYCNNYDLTSLNVKAGDIITVLEQHPDGRWKGCIHDNRTGNDRVGYFPS 339 HSP 2 Score: 130.568 bits (327), Expect = 3.150e-30 Identity = 55/136 (40.44%), Postives = 88/136 (64.71%), Query Frame = 0
Query: 844 SKTEQEVFDWLTELKLACYFDSFKKHGFDMASMQAITPDDLNFLEIHKTGHRKKLLSEIARLSFSERLPNNKPRDVGTWLGLLNLRQYEPNFVEGGFDDMDFIKDLDKNDLEMIDIKKRGHQKKLLLAVQRLNDLE 979
K+ + V WLT +L Y +F G+D+ ++ +TP+DL + + K GHRKK+ +EI+ LS + LP +KP ++ WL ++ L QY V+ G++++DFI D+ DL+ I I K GHQKKL+LAV++L +L+
Sbjct: 471 GKSSEAVSQWLTAFQLQLYAPNFISAGYDLPTISRMTPEDLTAIGVTKPGHRKKIAAEISGLSIPDWLPEHKPANLAVWLSMIGLAQYYKVLVDNGYENIDFITDITWEDLQEIGITKLGHQKKLMLAVRKLAELQ 606
The following BLAST results are available for this feature:
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