TCONS_00047684-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047684-protein
Unique NameTCONS_00047684-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length222

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047684-protein ID=TCONS_00047684-protein|Name=TCONS_00047684-protein|organism=Clytia hemisphaerica|type=polypeptide|length=222bp
LETPTNKYTRHTMSTEVTLEHLEALIHRDDGAKPAATGVQNLNTDLSALT
AAMFGIAGSIGAKDDDEDNKEEPSALKKILTSHEKDGEITKEDVELFLNE
LGSFPSDEEIVRKIDLVDHDDNGILDLKEFLLLLQNELEIMETEEDVIEA
FKVFDKDGNGFIKAAELRRVMTNLGDKLTDDEVDQMIRMSDLDGDGMVNY
EEFTRIMMDGIQTPAKPGLVIK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030364XLOC_030364Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047684TCONS_00047684Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 182..210
e-value: 1.7E-4
score: 30.9
coord: 146..174
e-value: 1.1E-5
score: 34.9
coord: 109..137
e-value: 6.2
score: 11.4
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 86..135
e-value: 0.02
score: 14.6
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 145..207
e-value: 1.7E-15
score: 57.1
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 105..140
score: 9.381
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 178..213
score: 12.226
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 142..177
score: 16.243
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 85..104
score: 6.563
IPR002048EF-hand domainCDDcd00051EFhcoord: 146..208
e-value: 1.41534E-19
score: 78.3585
NoneNo IPR availableGENE3D1.10.238.10coord: 63..98
e-value: 0.05
score: 13.0
NoneNo IPR availableGENE3D1.10.238.10coord: 99..122
e-value: 4.0E-5
score: 23.2
NoneNo IPR availableGENE3D1.10.238.10coord: 161..211
e-value: 7.1E-23
score: 80.1
NoneNo IPR availableGENE3D1.10.238.10coord: 123..160
e-value: 4.7E-17
score: 61.1
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 191..203
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 118..130
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 71..209

Blast
[Close]
BLAST of TCONS_00047684-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.905e-40
Identity = 69/144 (47.92%), Postives = 104/144 (72.22%), Query Frame = 0 
Query:   66 DEDNKEEPSALKKILTSHEKDGE--ITKEDVELFLNELGSFPSDEEIVRKIDLVDHDDNGILDLKEFLLLLQNELEIMETEEDVIEAFKVFDKDGNGFIKAAELRRVMTNLGDKLTDDEVDQMIRMSDLDGDGMVNYEEFTRIM 207
            D+  +E+ +  K+  +  +KDG+  IT +++   +  LG  P++ E+   I+ VD D NG +D  EFL ++  +++  ++EE++ EAF+VFDKDGNG+I AAELR VMTNLG+KLTD+EVD+MIR +D+DGDG VNYEEF ++M
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
The following BLAST results are available for this feature:
BLAST of TCONS_00047684-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM31.905e-4047.92Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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