TCONS_00051369-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051369-protein
Unique NameTCONS_00051369-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length679

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051369-protein ID=TCONS_00051369-protein|Name=TCONS_00051369-protein|organism=Clytia hemisphaerica|type=polypeptide|length=679bp
MPPTGIPIKCNKCLKVIKRQSETVLALQNTWHKHCFRCITCKERLRKVYY
SWKGELYCKKHYLEKYAHFCHICHKPISGLLMVSGEISFHHECFKCCKCR
ILIGHQENYVFEERSRLYCKKCYEIDIGIYLKFSKFKLFHKTAIHQIHVA
PRFFKKNSFTFKVNKESKDGLFTGLQKKMTTSKNVKPSKVTIESSEVQSL
KVGDTLLEINGTPITSDNIKQFSELLEIAEASKRISVTLERAPELSRPQD
QNVISTNGLETLDEQSPTSSYSSPTFQQQKSCEEENVFDPEVYKRNISYF
NFEVLKRCGSDSAISRYHIGQRKLNVIGEGTTAVSPREKFSQLTGESKQP
KKKNTLVKSFSIGDIHSQIPEEDDVNVSIKRDFLKGESPLHRAQSLKVVE
TSSNQIFRPSDLVIGECIGEGFFGEVSKITHKVTGKEMAMKKIFDIDEEA
IAQFMKEVHLLKSLRHPNVLQFIGVMFEDKTLHLLLEYMKTGTLWELIEH
KFVEFSEKLMTSLAKDIASGMSYLHSQNVMHRDLKSTNVLLKKHQGQYTA
IVADFGLATVMRAEEVPFSSTIPKSSFCSPTSPRSAMKFQKRTTFVGTAY
WMAPEILNGVKYDESVDVFSYAITLCELISRTRNDGDSIPRKRDYSLDVG
AFKKMLTLNCPPLLFDLCALCGDFDPVKS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032553XLOC_032553Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051369TCONS_00051369Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR001781Znf_LIM
IPR008271Ser/Thr_kinase_AS
IPR017441Protein_kinase_ATP_BS
IPR001478PDZ
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004672 protein kinase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000719Protein kinase domainSMARTSM00220serkin_6coord: 412..664
e-value: 4.5E-46
score: 169.1
IPR000719Protein kinase domainPFAMPF00069Pkinasecoord: 415..632
e-value: 9.4E-51
score: 172.6
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 412..679
score: 37.22
IPR001781Zinc finger, LIM-typeSMARTSM00132lim_4coord: 9..61
e-value: 3.5E-12
score: 56.5
coord: 69..122
e-value: 2.0E-10
score: 50.6
IPR001781Zinc finger, LIM-typePFAMPF00412LIMcoord: 10..65
e-value: 8.2E-12
score: 45.1
coord: 70..124
e-value: 8.4E-8
score: 32.2
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 70..103
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 10..45
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 69..129
score: 9.415
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 8..68
score: 13.068
NoneNo IPR availableGENE3D3.30.200.20coord: 390..476
e-value: 4.2E-22
score: 77.6
NoneNo IPR availableGENE3D2.10.110.10coord: 68..127
e-value: 6.8E-11
score: 41.6
NoneNo IPR availableGENE3D2.10.110.10coord: 7..67
e-value: 1.7E-13
score: 49.7
NoneNo IPR availableGENE3D2.30.42.10coord: 179..270
e-value: 1.0E-6
score: 28.0
NoneNo IPR availableGENE3D1.10.510.10coord: 477..637
e-value: 2.0E-43
score: 148.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..283
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 37..99
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 94..124
IPR008271Serine/threonine-protein kinase, active sitePROSITEPS00108PROTEIN_KINASE_STcoord: 529..541
IPR017441Protein kinase, ATP binding sitePROSITEPS00107PROTEIN_KINASE_ATPcoord: 418..441
IPR001478PDZ domainPROSITEPS50106PDZcoord: 160..241
score: 8.647
IPR011009Protein kinase-like domainSUPERFAMILY56112Protein kinase-like (PK-like)coord: 394..677

Blast
[Close]
BLAST of TCONS_00051369-protein vs. Swiss-Prot (Human)
Match: LIMK1 (LIM domain kinase 1 OS=Homo sapiens GN=LIMK1 PE=1 SV=3)

HSP 1 Score: 253.062 bits (645), Expect = 9.278e-75
Identity = 133/292 (45.55%), Postives = 183/292 (62.67%), Query Frame = 0 
Query:  390 LHRAQSLKVVETSSNQIFRPSDLVIGECIGEGFFGEVSKITHKVTGKEMAMKKIFDIDEEAIAQFMKEVHLLKSLRHPNVLQFIGVMFEDKTLHLLLEYMKTGTLWELIEHKFVEFSEKLMTSLAKDIASGMSYLHSQNVMHRDLKSTNVLLKKHQGQYTAIVADFGLATVMRAEEVPFSSTIPKSSFCSPTSPRSAMK--FQKRTTFVGTAYWMAPEILNGVKYDESVDVFSYAITLCELISRTRNDGDSIPRKRDYSLDVGAF-KKMLTLNCPPLLFDLCALCGDFDPVK 678
            L R++SL+VV    ++IFRPSDL+ GE +G+G FG+  K+TH+ TG+ M MK++   DEE    F+KEV +++ L HPNVL+FIGV+++DK L+ + EY+K GTL  +I+    ++      S AKDIASGM+YLHS N++HRDL S N L+++++     +VADFGLA +M  E+              P   RS  K   +KR T VG  YWMAPE++NG  YDE VDVFS+ I LCE+I R   D D +PR  D+ L+V  F  +    NCPP  F +   C D DP K
Sbjct:  318 LGRSESLRVV-CRPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENK---NVVVADFGLARLMVDEKT------------QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEK 593

HSP 2 Score: 118.627 bits (296), Expect = 9.030e-28
Identity = 87/292 (29.79%), Postives = 130/292 (44.52%), Query Frame = 0 
Query:    6 IPIKCNKCLKVIKRQSETVLALQNTWHKHCFRCITCKERLRKVYYSWKGELYCKKHYLEKYAHFCHICHKPIS-GLLMVSGEISFHHECFKCCKCRILIGHQENYVFEERSRLYCKKCYEIDI------GIYLKFSKFKLFHKTAIHQIHVAPRFFKKNSFTFKVNKESKDGLFTGLQKKMTTSKNVKPSKVTIESSEVQ-SLKVGDTLLEINGTPITSDNIKQFSELLEIAEASKRISVTLERAPELSRPQDQNVISTNGLETLDEQSPTSSYS-SPTFQQQKSCEEENVF 288
            +P+ C  C + I    + + AL   WH  CFRC  C   L   YY   G+L+CKK Y  +Y   CH C + I+ GL+MV+GE+ +H ECF C  C   IG  + Y   E S+LYC  CY   +       I        L H   +  + +      K   +  ++         G   + + +  V+       S +V+ S+ VGD +LEINGTPI +  + +    L I E S+ + +TLE  P            T G     E SP SS + +P+ +   S  ++ V 
Sbjct:   22 LPV-CASCGQRIY-DGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWARYGESCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEHSKLYCGHCYYQTVVTPVIEQILPDSPGSHLPHTVTL--VSIPASSHGKRGLSVSIDPPHGP---PGCGTEHSHTVRVQGVDPGCMSPDVKNSIHVGDRILEINGTPIRNVPLDEID--LLIQETSRLLQLTLEHDPH----------DTLGHGLGPETSPLSSPAYTPSGEAGSSARQKPVL 294
The following BLAST results are available for this feature:
BLAST of TCONS_00051369-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LIMK19.278e-7545.55LIM domain kinase 1 OS=Homo sapiens GN=LIMK1 PE=1 ... [more]
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