TCONS_00053581-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00053581-protein
Unique Name	TCONS_00053581-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1207

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00053581-protein ID=TCONS_00053581-protein|Name=TCONS_00053581-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1207bp
IEILIKMKITVRTLDSQNHDFEIDNEEITVKEFKELILPKVGIPVDKQRI
IFKGKVLSDEKLLKEYNVDNCVVHLVQRAPPTAASSSSSASASSRPSQPS
SSRPSRNTSQNPTDELNGVAQHIVESLVSQFGAGNVSANQNGNSLNVNIN
VSNPSMGEQDVIQRLTTARRFLSHAEHLLEHITEPEDGGEDTDQPMDSSP
STDAPSELNCPSAHDDDESSSDETNTEEQPLDSSARSLRRIYNQFFQFYS
QFQPSFQRYRDMLENPQASVRSPSDDMLSPQISEIFHDLSHAFHALSDLT
YNFTGPEPRSVMCYPRMSPIHAMPHISPQVHMSTMRPRGSGSTTENSSSS
TAPTSTSPSNQQSGGSGRPVAVAAISTVVHIPAIQISSMMRNSSSSSSSS
STSSNTTSTGSVSSNTTTNNTTTNTSSTTSTGPTPEQMFQNMMRNGNFQS
FSSSSGGATGSGNSQVNFGMFPAGQFGMMSSSSTGRQETSESNSEGTFTM
SSSTSGNLSEGLQSMMQGIMQNISNMHGGTQNNPTSSTTSTTSTNTTPSS
TESASDTSSSQPSPSPRHPHFHHGHHHHHHHNNANSRPNNHQNTTNERRN
PSMNYRPHVHHHHHNHDGSVIHPDSLLPCQSFHFGPTFHGESSGDGEVVA
EMNNIVVGQRNEPAGEPTTTVTPSSNREQQQQQQQQQQTDSQQTQQQDNS
ANSGSSAPSPTDFLSTLFGSLGGGGNPRQQQQRGGGMMGAGGGMNMGMGG
GAGGNPFQMFQQMMRSPMMQSLIPGATPPSSTPSAMYDFMSGDQSVREFI
QENFGLADDGESGGFISDVIDVLADRLALTDLMSIFMGSTHAYGRIHGPL
RQVVQRHFNNDERLTEENVKQVATAMAKNLQETAIEIQPRITVRNDVDLS
ASLLNIDVRYLEKFLRLLMGSDRIFSYSVPSWYSEYASWSFALLDHAVTG
GGDAFMRAAFNSPTFSSFLTDMPEQTRQMTLQVLLSRLRSATAGRTITQE
QLNTIIVRPSAAPSCSAKAESSCEGERAAKRQKKTEEDKVDVNALWEEMS
CSMQQNESDDDNENNPPSPEDWHSQLPNDWVVVINRDIERQRRRHPQRPY
SDAYINGLPKKKRKLMTRHSAEADTVDIKHCVKSAISKTNTKPKDEAKFE
QDIDENDLQSMFESTFRHDVRQRLQKDGDYTPNRHPHSEDYFVKGIDKQK
KKKEDGK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033813	XLOC_033813	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00053581	TCONS_00053581	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000626	Ubiquitin_dom
IPR021925	DUF3538
IPR029071	Ubiquitin-rel_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 677..697
None	No IPR available	GENE3D	1.10.110.10		coord: 70..740 e-value: 3.9E-9 score: 36.0
None	No IPR available	GENE3D	3.10.20.90		coord: 3..69 e-value: 7.1E-20 score: 70.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1016..1040
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 524..622
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 331..369
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 659..742
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1166..1207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1052..1077
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 390..510
None	No IPR available	CDD	cd01809	Scythe_N	coord: 7..78 e-value: 1.13436E-29 score: 113.476
IPR000626	Ubiquitin domain	SMART	SM00213	ubq_7	coord: 7..78 e-value: 2.1E-19 score: 80.5
IPR000626	Ubiquitin domain	PFAM	PF00240	ubiquitin	coord: 9..78 e-value: 2.0E-17 score: 62.6
IPR000626	Ubiquitin domain	PROSITE	PS50053	UBIQUITIN_2	coord: 7..70 score: 16.451
IPR021925	Protein of unknown function DUF3538	PFAM	PF12057	DUF3538	coord: 244..332 e-value: 4.1E-13 score: 48.9
IPR029071	Ubiquitin-related domain	SUPERFAMILY	54236	Ubiquitin-like	coord: 7..96

Blast

[Close]

BLAST of TCONS_00053581-protein vs. Swiss-Prot (Human)
Match: BAG6 (Large proline-rich protein BAG6 OS=Homo sapiens GN=BAG6 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 5.806e-26
Identity = 97/424 (22.88%), Postives = 180/424 (42.45%), Query Frame = 0

Query:  794 QSVREFIQENFGLADDGESG-----GFISDVIDVLADRLALTDLMSIFMGSTHAYGRIHGPLRQVVQRHFNNDERLTEENVKQVATAMAKNLQETAIEIQPRITVRNDVDLSASLLNIDVRYL-EKF----LRLLMGSDRIFSYSVPSWYSEYASWSFALLDHAVTGGGDAFMRAAFN----------SPTFSSFLTDMPEQTRQMTLQVLLSRLRSATAGRTITQEQLNTIIVRPSAAPSCSAKAESSCEG-ERAAKRQKKTEEDKVDVNALWEEMS---CSMQQNESDDDNENNPPSPEDWHSQLPNDWVVVINRDIERQRRRHPQRPYSDAYINGLPKKKRKLMTRHSAEADTVDIKHCVKSAISKTNTKPKDEAK-FEQDIDENDLQSMFESTFRHDVRQRLQKDGDYTPNRHPHSEDYF 1192
            +S+  FIQ   G ++  E G     GF   ++ +L    ++ D++ +  G      R+   LR    +H+   +  T  N++     +   L+E   E    + V+  VD+    +  ++ +L E+F      +L  +D  F   +    ++      AL  H + GG    + A  N          +P+  S+LT M      + LQV+L  +        +  + +   + R    P    +     +G ERA+   ++            E MS       +  S D+ +      E W + +P +WV +I +DI+ QR+  PQ P SDAY++G+P K+RK M     E   + +   V  A      +P    +   +D++  ++Q  +    R D+++RLQ+D +Y+P R P+++  F
Sbjct:  724 ESIAAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHTLITGLEEYVRESFSLVQVQPGVDI----IRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCNQGLFECLALNLHCL-GGQQMELAAVINGRIRRMSRGVNPSLVSWLTTM----MGLRLQVVLEHM-------PVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTM---QGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQRAF 1128

HSP 2 Score: 93.2041 bits (230), Expect = 5.675e-19
Identity = 116/428 (27.10%), Postives = 173/428 (40.42%), Query Frame = 0

Query:    7 MKITVRTLDSQNHDFEIDNEEITVKEFKELILPKVGIPVDKQRIIFKGKVLSDEKLLKEYNVDNCVVHLVQRAPPTA--ASSSSSASASSRPSQPSSSRPSRNTSQNPTDELNGVAQHIVESLVSQFGAGNVSANQNGNSLNVNINVSNPSMGEQDVIQ-----RLTTARRFLSHAEHLLEHI-TEPE---DGGED-------------TDQPMDSSPSTDAPSELNCP-----------------------SAHDDDESSSDETNTEEQPLDSSARSLRRIYNQFFQFYSQFQPSFQRYRDMLENPQASVRS------PSDDMLSPQISEIFHDLSHAFHALSDLTYNFTGPEPRSVMCYPRMSPIHAMPHISPQVHMSTMRP--RGSGSTTENSSSSTAPTSTSPSNQQSGGSGRPVAVAAISTVV 379
            +++ V+TLDSQ   F I   ++ VKEFKE I   V IP +KQR+I++G+VL D+K L+EYNV   V+HLV+RAPP     S +SS + S+  +    S P          + N  +  +V         G  +   +G++++V+IN+      EQ  IQ     RL  A+  +   + LL  + T P     GG               T +P+  S  T  P E   P                              + + ETN    P   S      +  +  +  S+ QP  QRY ++L     +  +        D  L   + E    L + F ALSDL  N     PR +     MS  H   + +P V      P     G+T   + + T P  T  +     G G+  +VA  ST V
Sbjct:   17 LEVLVKTLDSQTRTF-IVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMV---------GTFNLPSDGSAVDVHINM------EQAPIQSEPRVRLVMAQHMIRDIQTLLSRMETLPYLQCRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHP---SPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMS--H---YTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNV 420

The following BLAST results are available for this feature:

BLAST of TCONS_00053581-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00053581-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BAG6	5.806e-26	22.88	Large proline-rich protein BAG6 OS=Homo sapiens GN...	[more]

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TCONS_00053581-protein (polypeptide) - C. hemisphaerica