TCONS_00054195-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054195-protein
Unique NameTCONS_00054195-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length451

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054195-protein ID=TCONS_00054195-protein|Name=TCONS_00054195-protein|organism=Clytia hemisphaerica|type=polypeptide|length=451bp
MSWAQALRDRNEKINKSKVVKEVSEEEQKKLDEEALSKYYAEYKEKLCAE
TKKDNSNQIPRFYFKLPSDDDVLQQKLREESRAVFLQRKSRELLDNDELH
ELWNLLEKHAAPPPVGEEQMINYEGFLKVKADAGSKCSQFFKPITFAKLY
QKDPYGRISIMQFFNYVMRKVWLYQTRIGLSLYDVAGQGFLRESDLENYI
LELIPTLPQLDGLEKNFYSFYVCTAVRKFFFFLDPMHTGKIKIQDVLSCS
FLDDLLELRDEVLSKEKQDANWFSAPSALRVYGQYLNLDTDHNGMLSKDE
LKKYGTGTLTDCFLDRVFQECLTYEGEMDYKTYLDFVLALENKKEPQALQ
YLFKILDVQHNAYLNTFSLNFFFRAIQEEMNKHGHEEVTLHDVKDEIFDM
VKPKHPLHITLQDLVNSAQGDTVMNILIDVNGFLTYENRELLVLEDNEDV
I
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034184XLOC_034184Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054195TCONS_00054195Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 286..365
e-value: 3.3E-7
score: 30.6
NoneNo IPR availableGENE3D1.10.238.10coord: 268..428
e-value: 8.0E-14
score: 51.0
NoneNo IPR availableGENE3D1.10.238.10coord: 3..267
e-value: 3.0E-5
score: 22.9
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 289..301
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 268..417

Blast
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BLAST of TCONS_00054195-protein vs. Swiss-Prot (Human)
Match: P2R3C (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Homo sapiens GN=PPP2R3C PE=1 SV=1)

HSP 1 Score: 662.914 bits (1709), Expect = 0.000e+0
Identity = 326/457 (71.33%), Postives = 372/457 (81.40%), Query Frame = 0 
Query:    1 MSWAQALRDR----NEKINKSKVVKEVSEEEQKKLDEEALSKYYAEYKEKLCAETKKDNSNQ----IPRFYFKLPSDDDVLQQKLREESRAVFLQRKSRELLDNDELHELWNLLEKHAAPPPVGEEQMINYEGFLKVKADAGSKCSQFFKPITFAKLYQKDPYGRISIMQFFNYVMRKVWLYQTRIGLSLYDVAGQGFLRESDLENYILELIPTLPQLDGLEKNFYSFYVCTAVRKFFFFLDPMHTGKIKIQDVLSCSFLDDLLELRDEVLSKEKQDANWFSAPSALRVYGQYLNLDTDHNGMLSKDELKKYGTGTLTDCFLDRVFQECLTYEGEMDYKTYLDFVLALENKKEPQALQYLFKILDVQHNAYLNTFSLNFFFRAIQEEMNKHGHEEVTLHDVKDEIFDMVKPKHPLHITLQDLVNSAQGDTVMNILIDVNGFLTYENRELLVLEDNED 449
            M W + LR R    N   NK K  +E+ +EE      +  +KYY+E+K        + N+N+    IPRFY++LP++D+VL QKLREESRAVFLQRKSRELLDN+EL  LW LL+KH  PP +GEE MINYE FLKV   AG+KC QFF    FAKL   D YGRISIMQFFNYVMRKVWL+QTRIGLSLYDVAGQG+LRESDLENYILELIPTLPQLDGLEK+FYSFYVCTAVRKFFFFLDP+ TGKIKIQD+L+CSFLDDLLELRDE LSKE Q+ NWFSAPSALRVYGQYLNLD DHNGMLSK+EL +YGT T+T+ FLDRVFQECLTY+GEMDYKTYLDFVLALEN+KEP ALQY+FK+LD+++  YLN FSLN+FFRAIQE M  HG + V+  DVKDEIFDMVKPK PL I+LQDL+NS QGDTV  ILID+NGF TYENRE LV  D+E+
Sbjct:    1 MDWKEVLRRRLATPNTCPNKKKSEQELKDEEM-----DLFTKYYSEWK------GGRKNTNEFYKTIPRFYYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVGEKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTTILIDLNGFWTYENREALVANDSEN 446
The following BLAST results are available for this feature:
BLAST of TCONS_00054195-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
P2R3C0.000e+071.33Serine/threonine-protein phosphatase 2A regulatory... [more]
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