TCONS_00055067-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055067-protein
Unique NameTCONS_00055067-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length488

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055067-protein ID=TCONS_00055067-protein|Name=TCONS_00055067-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
MHQKTHSGTNPYFCKTCDIYFPRKSKLTKHLKTKSHQRKCSNQTMEDSTE
ESCLDDTTDEPPAKRNRQDFEQSVDENQKPLECQHCCQRFPSEEEKSSHQ
CCLLRDKKPKIQPKEYLKSRAHYKKFVCPLCDVEYFSYVELNQHLTTEHT
VTEETTFPCKTCDVTYQSKDKWVQHLNDTKHMSLLQPYFRATCCEKTFKT
HKACYNHERVHTRSSPYHCARCDRYFLKRHHLTVHLEGCVDSERPYQCPF
CVRTYKTSSQLQHHLEGGHSFQCATCLENFTCKPHLKTHLEESPTCIKNI
CSRCNNLEFETYEQLLKHKEESHSTKGRKTFSCSDCGKTYCEAFKLKQHM
KWHETGRYPYQCTVEGCTIICYKKSKLDSHHKRVHLKLMEYECSACGEEF
KTKKNLDEHSSKVHGTESFTCPVCDKEFYSLRTFKAHELTHSKLPTQTHL
SNTSAINNSRNTTNGDDVLLXLQQSTIVETLLTEMTYC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034692XLOC_034692Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055067TCONS_00055067Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR003604Matrin/U1-like-C_Znf_C2H2
IPR022755Znf_C2H2_jaz
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 391..414
e-value: 0.0054
score: 25.9
coord: 157..181
e-value: 1.8
score: 17.5
coord: 246..269
e-value: 0.0079
score: 25.4
coord: 419..441
e-value: 0.0049
score: 26.1
coord: 271..291
e-value: 230.0
score: 1.3
coord: 126..149
e-value: 0.034
score: 23.3
coord: 360..385
e-value: 0.59
score: 19.2
coord: 331..353
e-value: 0.96
score: 18.5
coord: 299..323
e-value: 13.0
score: 12.4
coord: 189..211
e-value: 250.0
score: 0.9
coord: 12..36
e-value: 0.071
score: 22.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 14..36
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 421..441
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 128..149
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 333..353
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 248..269
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 393..414
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 159..181
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 331..359
score: 11.468
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 12..39
score: 9.723
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 419..446
score: 9.494
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 246..270
score: 9.162
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 189..216
score: 9.307
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 391..419
score: 11.489
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 217..245
score: 10.118
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 1..33
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 124..176
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 391..441
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 242..289
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 340..400
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 197..252
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 9..43
e-value: 7.6E-4
score: 28.8
coord: 154..188
e-value: 6.2
score: 5.9
NoneNo IPR availableGENE3D2.20.28.10coord: 402..423
e-value: 4.5E-8
score: 32.4
coord: 341..371
e-value: 2.7E-6
score: 26.7
NoneNo IPR availableGENE3D2.60.260.40coord: 253..281
e-value: 1.4E-7
score: 31.1
NoneNo IPR availableGENE3D3.30.160.60coord: 424..443
e-value: 0.002
score: 17.8
NoneNo IPR availableGENE3D3.30.160.60coord: 206..226
e-value: 8.3E-7
score: 28.4
NoneNo IPR availableGENE3D3.30.160.60coord: 188..205
e-value: 0.024
score: 14.3
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 246..269
e-value: 0.0017
score: 18.6
coord: 331..353
e-value: 0.0028
score: 17.9
coord: 419..441
e-value: 0.0057
score: 16.9
NoneNo IPR availableGENE3D3.30.160.60coord: 282..311
e-value: 0.45
score: 10.2
coord: 227..252
e-value: 4.2E-8
score: 32.7
NoneNo IPR availableGENE3D3.30.160.60coord: 1..61
e-value: 3.8E-9
score: 35.9
NoneNo IPR availableGENE3D3.30.160.60coord: 372..401
e-value: 5.9E-7
score: 29.3
coord: 79..136
e-value: 0.0068
score: 16.2
coord: 137..181
e-value: 4.3E-7
score: 29.7
coord: 312..340
e-value: 1.2E-5
score: 25.1
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 12..37
e-value: 4.1E-5
score: 23.6

Blast
BLAST of TCONS_00055067-protein vs. Swiss-Prot (Human)
Match: Z585B (Zinc finger protein 585B OS=Homo sapiens GN=ZNF585B PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.831e-32
Identity = 115/445 (25.84%), Postives = 191/445 (42.92%), Query Frame = 0
Query:    1 MHQKTHSGTNPYFCKTCDIYFPRKSKLTKHLKTKSHQRKCSNQTMEDSTEESCLDDTTDEPPAKRNRQDFEQSVDENQKPLECQHCCQRFPSEEEKSSHQCCLLRDKKPKIQPKEYLKSRAHYKKFVCPLCDVEYFSYVELNQHLTTEHTVTEETTFPCKTCDVTYQSKDKWVQHLNDTKHMSLLQPYFRATCCEKTFKTHKACYNHERVHTRSSPYHCARCDRYFLKRHHLTVHLEGCVDSERPYQCPFCVRTYKTSSQLQHHLE---GGHSFQCATCLENFTCKPHLKTHLEESPTCIKNICSRCNNLEFETYEQLLKHKEESHSTKGRKTFSCSDCGKTYCEAFKLKQHMKWHETGRYPYQCTVEGCTIICYKKSKLDSHHKRVHLKLMEYECSACGEEFKTKKNLDEHSSKVHGTESFTCPVCDKEFYSLRTFKAHELTHS 442
            +HQ+ H+G  PY C  C   F +KS LT H +               + E+S +         ++      Q +   +KP +C HC + F S+ +   H+         +I   E        K +VC  C   + +   L   +T + T T E ++ C  C   +  +   + H    + +   +  +    C K F        H+++HT    Y C  C + F ++  L VH +     E+PY C  C R +   S    H     G   ++C+ C ++FT K  L  H          +C+ C    F     L KH +++H+  G K + CS+CGKT+ +  +L  H + H TG  PY+C+  G +    KKS+L  H +R+H     Y C+ CG+ F  + NL++H +   G + + C +C K F     F  H+ +H+
Sbjct:  371 IHQRIHTGEKPYECSDCGRAFTQKSALTVHQRI-------------HTGEKSYICMKCGLAFIRKAHLITHQIIHTGEKPYKCGHCGKLFTSKSQLHVHK---------RIHTGE--------KPYVCNKCGKAFTNRSNL---ITHQKTHTGEKSYICSKCGKAFTQRSDLITH----QRIHTGEKPYECNTCGKAFTQKSNLNIHQKIHTGERQYECHECGKAFNQKSILIVH-QKIHTGEKPYVCTECGRAFIRKSNFITHQRIHTGEKPYECSDCGKSFTSKSQLLVHQPVHTGEKPYVCAECGKA-FSGRSNLSKH-QKTHT--GEKPYICSECGKTFRQKSELITHHRIH-TGEKPYECSDCGKSFT--KKSQLQVH-QRIHTGEKPYVCAECGKAFSNRSNLNKHQTTHTGDKPYKCGICGKGFVQKSVFSVHQSSHA 769          

HSP 2 Score: 112.464 bits (280), Expect = 2.590e-26
Identity = 117/473 (24.74%), Postives = 185/473 (39.11%), Query Frame = 0
Query:    1 MHQKTHSGTNPYFCKTCDIYFPRKSKLTKHLKTKSHQRKCSNQTMEDSTEESCLDDTTDEPPAKRNRQDFEQSVDENQKPLECQHCCQRFPSEEEKSSHQCCLLRDKKPKIQPKEYLKSRAHYKKFVCPLCDVEYFSYVELNQHLTT-EHTVTEETTFPCKTCDVTYQSKDKWVQHLNDTKHMSLLQPYFRATCCEKTFKTHKACYNHERVHTRSSPYHCARCDRYFLKRHHLTVHLEGCVDSERPYQCPFCVRTYKTSSQLQHHLE---GGHSFQCATCLENFTCKPHLKTHLEESPTCIKNICSRCNNLEFETYEQLLKHKEESHSTKGRKTFSCSDCGKTYCEAFKLKQHMKWH---------------------------ETGRYPYQCTVEGCTIICYKKSKLDSHHKRVHLKLMEYECSACGEEFKTKKNLDEHSSKVHGTESFTCPVCDKEFYSLRTFKAHELTHS 442
            +H+K H+G   + C  C   F +KS L  H K  + +R             S +     +   ++ +    + +   +KP EC +C + F S+ +   HQ                   R H +  V P    EY      N +L T E   + E +  C  C   +  + + + H    + +   +  +  + C + F    A   H+R+HT    Y C +C   F+++ HL  H +     E+PY+C  C + + + SQL  H     G   + C  C + FT + +L TH +        ICS+C    F     L+ H +  H+  G K + C+ CGK + +   L  H K H                            TG  PY CT  G   I  +KS   + H+R+H     YECS CG+ F +K  L  H     G + + C  C K F        H+ TH+
Sbjct:  231 IHEKIHTGERHHECTDCGKAFTQKSTLKIHQKIHTGER-------------SYICIECGQAFIQKTQLIAHRRIHSGEKPYECNNCGKSFISKSQLQVHQ-------------------RVHTR--VKPYICTEYGKVFSNNSNLITHEKIQSREKSSICTECGKAFTYRSELIIH----QRIHTGEKPYECSDCGRAFTQKSALTVHQRIHTGEKSYICMKCGLAFIRKAHLITH-QIIHTGEKPYKCGHCGKLFTSKSQLHVHKRIHTGEKPYVCNKCGKAFTNRSNLITHQKTHTGEKSYICSKCGKA-FTQRSDLITH-QRIHT--GEKPYECNTCGKAFTQKSNLNIHQKIHTGERQYECHECGKAFNQKSILIVHQKIHTGEKPYVCTECGRAFI--RKSNFIT-HQRIHTGEKPYECSDCGKSFTSKSQLLVHQPVHTGEKPYVCAECGKAFSGRSNLSKHQKTHT 657          

HSP 3 Score: 103.219 bits (256), Expect = 3.379e-23
Identity = 118/463 (25.49%), Postives = 179/463 (38.66%), Query Frame = 0
Query:    2 HQKTHSGTNPYFCKTCDIYFPRKSKLTKHLKTKSHQR-----KCSNQTMEDST----------EESCLDDTTDEPPAKRNRQDFEQSVDENQKPLECQHCCQRFPSEEEKSSHQCCLLRDKKPKIQPKEYLKSRAHYKKFVCPLCDVEYFSYVELNQHLTTEHTVTEETTFPCKTCDVTYQSKDKWVQHLNDTKHMSLLQPYFRATCCEKTFKTHKACYNHERVHTRSSPYHCARCDRYFLKRHHLTVHLEGCVDSERPYQCPFCVRTYKTSSQLQHHL---EGGHSFQCATCLENFTCKPHL----KTHLEESPTCIKNICSRCNNLEFETYEQLLKHKEESHSTKGRKTFSCSDCGKTYCEAFKLKQHMKWHETGRYPYQCTVEGCTIICYKKSKLDSHHKRVHLKLMEYECSACGEEFKTKKNLDEHSSKVHGTESFTCPVCDKEFYSLRTFKAHELTHS 442
            H + H+G   Y C  C   FP  S L+ H K  + +R      C     + ST          E S +     +   ++ +    + +   +KP EC +C + F S+ +   HQ                   R H +  V P    EY      N +L T   +               QS++K           S+       T C K F        H+R+HT   PY C+ C R F ++  LTVH +     E+ Y C  C   +   + L  H     G   ++C  C + FT K  L    + H  E P     +C++C    F     L+ H +++H+  G K++ CS CGK + +   L  H + H TG  PY+C    C     +KS L+ H K +H    +YEC  CG+ F  K  L  H     G + + C  C + F     F  H+  H+
Sbjct:  204 HHRIHTGEKLYECSECGKGFPYNSDLSIHEKIHTGERHHECTDCGKAFTQKSTLKIHQKIHTGERSYICIECGQAFIQKTQLIAHRRIHSGEKPYECNNCGKSFISKSQLQVHQ-------------------RVHTR--VKPYICTEYGKVFSNNSNLITHEKI---------------QSREK----------SSI------CTECGKAFTYRSELIIHQRIHTGEKPYECSDCGRAFTQKSALTVH-QRIHTGEKSYICMKCGLAFIRKAHLITHQIIHTGEKPYKCGHCGKLFTSKSQLHVHKRIHTGEKPY----VCNKCGKA-FTNRSNLITH-QKTHT--GEKSYICSKCGKAFTQRSDLITHQRIH-TGEKPYECNT--CGKAFTQKSNLNIHQK-IHTGERQYECHECGKAFNQKSILIVHQKIHTGEKPYVCTECGRAFIRKSNFITHQRIHT 601          
The following BLAST results are available for this feature:
BLAST of TCONS_00055067-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
Z585B4.831e-3225.84Zinc finger protein 585B OS=Homo sapiens GN=ZNF585... [more]
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