TCONS_00055452-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00055452-protein
Unique Name	TCONS_00055452-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	787

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00055452-protein ID=TCONS_00055452-protein|Name=TCONS_00055452-protein|organism=Clytia hemisphaerica|type=polypeptide|length=787bp
MFYSKSLLQKFSSSHILNKSEPTNKGIYNLLNSIFKSANKPLKIERLPKH
LLHTKNLFKTLLTSFKKLKLRRLLNFYCPLPKWIVGQHLRTQRSRRKVDY
QQTARAFTPVRQVYLWTRKVLSNVIPPLLWGSEQNKKTLLKAVLLFLTRR
RYERLTLRNVMKGIKTSHYTCFEQSLQRQPKTAQYSLKKERLVQMFIQWI
FNELLVPLLKACFYITETGTHRNKVFYYRKPVWSVLRRIGMKPLLGTLFR
TVSRNTVNEMLASRRCIGVHDIRFIPSQKKVRAIANLTKGHVVTPSNVNA
SAPTAALKRNKPSSINNELRPLHLSLCYESFFKSSLLGVGVTRPDQIFEK
WLEFVNNCKSQYKCIPKLYAISLDIKRCFDTLPQDRILKLISEILKEDSY
VIKKFVKIKNSQNGCVTKKFVSLATDGFDCTNFVSFIREQIKCGRLVGQN
VVFVDKVFYRCETRDSMLSLVAKHIKCSIGNASDRYLLQNTGIAQGSILA
TTLNNIHYGDIENKYLVSTYQTLESFFIRWVDDYFFVTTSLQLARKFLND
MNRNMPNYGANLNLDKLSVNFKISGQPSTFERCQGDWFTWCGYLFNLQTM
ECCYNYMQYIGESIKDGMTFQYGSHRGLSMAKQLVLAVTVKASPLIVDEN
FNSISNAHKNIYQVFRYAALKFLAHAQALRQDQGLNIMFCFRTIKKLPLK
FHKRLQQNYQKHHSKHPGSKAGHSISLQKIKGLCYQAFVDELRRHQTGYK
RLIGLLVFELKLLKEHLVDIDLTDIRERSQYFKMIKL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034894	XLOC_034894	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00055452	TCONS_00055452	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003545	Telomerase_RT
IPR021891	Telomerase_RBD
IPR000477	RT_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003721	telomerase RNA reverse transcriptase activity
GO:0003677	DNA binding
GO:0003964	RNA-directed DNA polymerase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0003721	telomerase RNA reverse transcriptase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003545	Telomerase reverse transcriptase	PRINTS	PR01365	TELOMERASERT	coord: 366..382 score: 39.87 coord: 526..538 score: 40.17 coord: 213..227 score: 45.19 coord: 487..503 score: 47.06
IPR021891	Telomerase ribonucleoprotein complex - RNA-binding domain	SMART	SM00975	Telomerase_RBD_2	coord: 111..246 e-value: 1.3E-34 score: 131.0
IPR021891	Telomerase ribonucleoprotein complex - RNA-binding domain	PFAM	PF12009	Telomerase_RBD	coord: 112..241 e-value: 6.2E-34 score: 116.9
None	No IPR available	GENE3D	3.30.70.270		coord: 340..593 e-value: 4.8E-17 score: 61.7
None	No IPR available	CDD	cd01648	TERT	coord: 484..596 e-value: 1.29469E-22 score: 93.483
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 256..595 score: 27.202

Blast

[Close]

BLAST of TCONS_00055452-protein vs. Swiss-Prot (Human)
Match: TERT (Telomerase reverse transcriptase OS=Homo sapiens GN=TERT PE=1 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 2.772e-77
Identity = 221/812 (27.22%), Postives = 375/812 (46.18%), Query Frame = 0

Query:    2 FYSKSLLQKFSSSHILNKSEPTNKGIYNLLNSIFKSA-----NKPLKIERLPKHLLHTKNLFKTLLTSFKKLKLRRLLNFYCPL-----PKWIVGQHLRTQRSRRKVDYQQTA--------RAFTPVRQVYLWTRKVLSNVIPPLLWGSEQNKKTLLKAVLLFLTRRRYERLTLRNVMKGIKTSHYTCFEQSLQRQP-----KTAQYSLKKERLVQMFIQWIFNELLVPLLKACFYITETGTHRNKVFYYRKPVWSVLRRIGMKPLLGTL-FRTVSRNTVNEMLASRRCIGVHDIRFIPSQKKVRAIANLTKGHVVTPSNVNASAPTAALKRNKPSSINNELRPLHLSLCYESFFKSSLLGVGVTRPDQIFEKWLEFVNNCKSQYKCIPKLYAISLDIKRCFDTLPQDRILKLISEILK-EDSYVIKKFVKIKNSQNGCVTKKFVSLATDGFDCT----NFVSFIREQIKCGRLVGQNVVFVDKVFYRCETRDSMLSLVAKHIKCSIGNASDRYLLQNTGIAQGSILATTLNNIHYGDIENKYLVSTYQTLESFFIRWVDDYFFVTTSLQLARKFLNDMNRNMPNYGANLNLDKLSVNFKIS----GQPSTFERCQGDWFTWCGYLFNLQTMECCYNYMQYIGESIKDGMTFQYGSHRGLSMAKQLVLAVTVKASPLIVDENFNSISNAHKNIYQVFRYAALKFLAHAQALR----QDQGLNIMFCFRTIKKLPLKFHKRLQQNYQKHHSKHPGSK-AGHSISLQKIKGLCYQAFVDELRRHQTGYKRLIGLLVFELKLLKEHLVDIDLTDI 775
             YS    ++   S +L+   P+  G   L+ +IF  +       P ++ RLP+     + LF  LL +  +     LL  +CPL     P   V    + Q S    + + T         R  +   QVY + R  L  ++PP LWGS  N++  L+    F++  ++ +L+L+ +    K S   C    L+R P       A++ L++E L + F+ W+ +  +V LL++ FY+TET   +N++F+YRK VWS L+ IG++  L  +  R +S   V +   +R  +    +RFIP    +R I N+   +VV              +  +   + + ++ L   L YE   +  LLG  V   D I   W  FV   ++Q    P+LY + +D+   +DT+PQDR+ ++I+ I+K +++Y ++++  ++ + +G V K F S  +   D       FV+ ++E         ++ V +++     E    +  +  + +         +  +Q  GI QGSIL+T L ++ YGD+ENK      +  +   +R VDD+  VT  L  A+ FL  + R +P YG  +NL K  VNF +     G  +  +      F WCG L + +T+E   +Y  Y   SI+  +TF  G   G +M ++L   + +K   L +D   NS+     NIY++    A +F  HA  L+    Q    N  F  R I       +  L+    K+     G+K A   +  + ++ LC+QAF+ +L RH+  Y  L+G L      L   L    LT +
Sbjct:  332 LYSSGDKEQLRPSFLLSSLRPSLTGARRLVETIFLGSRPWMPGTPRRLPRLPQRYWQMRPLFLELLGNHAQCPYGVLLKTHCPLRAAVTPAAGVCAREKPQGSVAAPEEEDTDPRRLVQLLRQHSSPWQVYGFVRACLRRLVPPGLWGSRHNERRFLRNTKKFISLGKHAKLSLQELT--WKMSVRDC--AWLRRSPGVGCVPAAEHRLREEILAK-FLHWLMSVYVVELLRSFFYVTETTFQKNRLFFYRKSVWSKLQSIGIRQHLKRVQLRELSEAEVRQHREARPALLTSRLRFIPKPDGLRPIVNMD--YVVGARTFR--------REKRAERLTSRVKALFSVLNYERARRPGLLGASVLGLDDIHRAWRTFVLRVRAQ-DPPPELYFVKVDVTGAYDTIPQDRLTEVIASIIKPQNTYCVRRYAVVQKAAHGHVRKAFKSHVSTLTDLQPYMRQFVAHLQETSPL-----RDAVVIEQSSSLNEASSGLFDVFLRFMCHHAVRIRGKSYVQCQGIPQGSILSTLLCSLCYGDMENKLFAGIRR--DGLLLRLVDDFLLVTPHLTHAKTFLRTLVRGVPEYGCVVNLRKTVVNFPVEDEALGGTAFVQMPAHGLFPWCGLLLDTRTLEVQSDYSSYARTSIRASLTFNRGFKAGRNMRRKLFGVLRLKCHSLFLDLQVNSLQTVCTNIYKILLLQAYRF--HACVLQLPFHQQVWKNPTFFLRVISDTASLCYSILK---AKNAGMSLGAKGAAGPLPSEAVQWLCHQAFLLKLTRHRVTYVPLLGSLRTAQTQLSRKLPGTTLTAL 1115

The following BLAST results are available for this feature:

BLAST of TCONS_00055452-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00055452-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TERT	2.772e-77	27.22	Telomerase reverse transcriptase OS=Homo sapiens G...	[more]

You are here

TCONS_00055452-protein (polypeptide) - C. hemisphaerica