TCONS_00056211-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056211-protein
Unique NameTCONS_00056211-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length357

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056211-protein ID=TCONS_00056211-protein|Name=TCONS_00056211-protein|organism=Clytia hemisphaerica|type=polypeptide|length=357bp
MDHCEIFVLYFFVFLNLTNALQMNSCSKDDFYLRKNVGRNVIFPGEIIDV
ENVRTYQQCFGYCQRYACSLFNFEEVAAGNFKCGVYPGPEFISRYSPKTR
FGIEPVHRFFFEKVPCQTDESSEYSFKGTFLEAENCKEVQENGGGETGIY
EVRVIGQPGQSRYIVCNMDLMDGGWTLFQRNYGPSHINFGKRWADYKSGF
GDLRYPFWAGNDFLHQLTQNEDTELLVVLKDADGDDHYAYFTTFYIDDEN
EKYRLTISGYQVVLTPALPQQTGAEQFMYHNQMVFVTSDNAPLGIACGTQ
YNNGWWYNNCFRVALNGDPNFVLPTGGTNTPLGIMWRLEVGGNWMIFRES
TMMVRKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035393XLOC_035393Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056211TCONS_00056211Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 131..357
e-value: 3.9E-27
score: 106.2
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 134..355
e-value: 4.2E-48
score: 164.0
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 127..357
score: 34.181
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 133..355
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 112..281
e-value: 2.2E-40
score: 138.2
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 282..349
e-value: 3.2E-11
score: 42.7

Blast
[Close]
BLAST of TCONS_00056211-protein vs. Swiss-Prot (Human)
Match: FGL2 (Fibroleukin OS=Homo sapiens GN=FGL2 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.873e-29
Identity = 78/218 (35.78%), Postives = 109/218 (50.00%), Query Frame = 0 
Query:  153 RVIGQPGQSRYIV-CNMDLMDGGWTLFQRNYGPSHINFGKRWADYKSGFGDLRYPFWAGNDFLHQLTQNEDTELLVVLKDADGDDHYAYFTTFYIDDENEKYRLTISGYQVVLTPALPQQTGAEQFMYHNQMVFVTS-----DNAPLGIACGTQYNNGWWYNNCFRVALNGDPNFVLPTGGTNTPLGIMW-------RLEVGGNWMIFRESTMMVRKK 357
            RV   P  S + V C+M+ M GGWT+ Q     S  NF + W DYK+GFG+LR  FW GND +H LT++++  L + L+D +G + YA +  FY+ +E  KYRL +  Y      AL          Y++ + F T+     D  P G  CG  Y++GWW++ C    LNG        G  N   GI W           GG    F+E+ MM+R K
Sbjct:  228 RVTPDPKNSSFEVYCDMETMGGGWTVLQARLDGS-TNFTRTWQDYKAGFGNLRREFWLGNDKIHLLTKSKEMILRIDLEDFNGVELYALYDQFYVANEFLKYRLHVGNYNGTAGDALRFNK-----HYNHDLKFFTTPDKDNDRYPSG-NCGLYYSSGWWFDACLSANLNGKYYHQKYRGVRN---GIFWGTWPGVSEAHPGGYKSSFKEAKMMIRPK 435
The following BLAST results are available for this feature:
BLAST of TCONS_00056211-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FGL26.873e-2935.78Fibroleukin OS=Homo sapiens GN=FGL2 PE=1 SV=1[more]
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