TCONS_00058820-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058820-protein
Unique NameTCONS_00058820-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length713

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058820-protein ID=TCONS_00058820-protein|Name=TCONS_00058820-protein|organism=Clytia hemisphaerica|type=polypeptide|length=713bp
MGCCGNGDKTDALEMEDHNGEGDDGKPAGKYGKSKKYDPNFAGPIKNRSC
TDVICCLLFAVYVIGMLAVGFLAYTWGDPKKLLFPTDSHGNVCGTGSHAD
QKYLFFFDLLECLPTSVQSVTDVTSLSITGCKTPQVCVKECPTTNWYYKT
SNDKSKLFCKDNTPMNQSISDLVDNGHCAKYTLQSEALAYRCVPTVIGET
LQSFLDTTGPITTDGRNVTTETIGWARVAQAVLVNLQNLGEKLIADVRET
WYWVLGGFGISMVVSLLYIIMMRWVAGLMVWLTTYLVLTIIGYATYYCLM
EYKRLADIDTSSIEFEFLSNVSSYADKKETWLALGIICGVVLLVLILLLL
ALRKRIVIAIQLIKEGSKCLSSMLSTLFFPLVPWLMQLILFAWFVAVMVY
LVTSGVAEYKEIKNNTLTEGICSAIDAAADEFGKNVTCSFQQYKTDDNIL
RLQIFHLFGWFWIMNFIIAFGQCALAGAYASWYWAWDKKTDVPKLPLMYS
MGRTLRYHCGSLAFGSLIIAIVQIIRAALEYLEYKLKGSGKEPSPVAKYL
LKCLKCFFWCLEKFLKFLNKNAYIEIAVYGKNFCTSAKNAFFLLMRNILR
VAVLDKVTDFLLFIGKLTVTGAMGVASFYFFSNRDDLNYNLAPVIIVTVA
TYAVASAFFGVYEMAINTIFLCFLEDCERHDGSKEKPFYMSKKLMKILGK
KNDKAVEESKNNN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037059XLOC_037059Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058820TCONS_00058820Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007603Choline_transptr-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007603Choline transporter-likePFAMPF04515Choline_transpocoord: 336..678
e-value: 1.2E-109
score: 366.4

Blast
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BLAST of TCONS_00058820-protein vs. Swiss-Prot (Human)
Match: CTL4 (Choline transporter-like protein 4 OS=Homo sapiens GN=SLC44A4 PE=1 SV=2)

HSP 1 Score: 546.584 bits (1407), Expect = 0.000e+0
Identity = 305/715 (42.66%), Postives = 441/715 (61.68%), Query Frame = 0 
Query:   31 YGKSKKYDPNFAGPIKNRSCTDVICCLLFAVYVIGMLAVGFLAYTWGDPKKLLFPTDSHGNVCGTGSHADQKYLFFFDLLECLPTSVQSVTDVTSLSITG--CKTPQVCVKECPTTNW------YYKTSND----KSKLFCKDNTPMNQSISDLVDNGHCAKYTLQSEALAYRCVPTVIGETLQSFLDTTGPITTDGRNVTTETIGWARVAQAVLVNLQNLGEKLIADVRETWYWVLGGFGISMVVSLLYIIMMRWVAGLMVWLTTYLVLTIIGYATYYCLMEYKRLADIDTSSIEFEFLSNVSSYADKKETWLALGIICGVVLLVLILLLLALRKRIVIAIQLIKEGSKCLSSMLSTLFFPLVPWLMQLILFAWFVAVMVYLVTSGVAEYKEIKNNTLTEGI--------CSAIDAAADEFGKNVTCSFQQYKTDDNILR----LQIFHLFGWFWIMNFIIAFGQCALAGAYASWYWAWDKKTDVPKLPLMYSMGRTLRYHCGSLAFGSLIIAIVQIIRAALEYLEYKLKGSGKEPSPVAKYLLKCLKCFFWCLEKFLKFLNKNAYIEIAVYGKNFCTSAKNAFFLLMRNILRVAVLDKVTDFLLFIGKLTVTGAMGVASFYFFSNR----------DDLNYNLAPVIIVTVATYAVASAFFGVYEMAINTIFLCFLEDCERHDGSKEKPFYMSKKLMKILGKKNDKAVEESKN 711
            YGK  KYDP+F GPIKNRSCTDVICC+LF ++++G + VG +A+ +GDP+++L+P +S G  CG G + D+ YL +F++  C+ +S     ++ S++  G  C TPQVCV  CP   W      + +T  +    K++ FC    P N ++   +    C  + L S     RC P         + + T P      N TT   G + +  ++  N +++  K+  D  ++WYW+L   G+++V+SLL+I+++R VAG +V +    VL ++ Y  YYC  EY+ L D   S  +  F +N+S+Y   +ETWLA  I+  V+  +L+L+L+ LR+RI IAI L+KE SK +  M+ST+F+PLV +++ LI  A++    +YL TSG  +Y    +N  + G         C+      +     + C FQ Y +   I R    LQI+ + G FW +N+++A GQC LAGA+AS+YWA+ K  D+P  PL+ +  RTLRYH GSLAFG+LI+ +VQI R  LEY+++KL+G     +PVA+ ++ C KC  WCLEKF+KFLN+NAYI IA+YGKNFC SAKNAF LLMRNI+RV VLDKVTD LLF GKL V G +GV SF+FFS R            LNY   P++   +  Y +AS FF V+ M ++T+FLCFLED ER++GS ++P+YMSK L+KILGKKN+   +  K 
Sbjct:   13 YGKPVKYDPSFRGPIKNRSCTDVICCVLFLLFILGYIVVGIVAWLYGDPRQVLYPRNSTGAYCGMGENKDKPYLLYFNIFSCILSS-----NIISVAENGLQCPTPQVCVSSCPEDPWTVGKNEFSQTVGEVFYTKNRNFCLPGVPWNMTVITSLQQELCPSFLLPSAPALGRCFP---------WTNVTPPALPGITNDTTIQQGISGLIDSL--NARDISVKIFEDFAQSWYWILVALGVALVLSLLFILLLRLVAGPLVLVLILGVLGVLAYGIYYCWEEYRVLRDKGASISQLGFTTNLSAYQSVQETWLAALIVLAVLEAILLLMLIFLRQRIRIAIALLKEASKAVGQMMSTMFYPLVTFVLLLICIAYWAMTALYLATSGQPQYVLWASNISSPGCEKVPINTSCNPTAHLVNSSCPGLMCVFQGYSSKGLIQRSVFNLQIYGVLGLFWTLNWVLALGQCVLAGAFASFYWAFHKPQDIPTFPLISAFIRTLRYHTGSLAFGALILTLVQIARVILEYIDHKLRGVQ---NPVARCIMCCFKCCLWCLEKFIKFLNRNAYIMIAIYGKNFCVSAKNAFMLLMRNIVRVVVLDKVTDLLLFFGKLLVVGGVGVLSFFFFSGRIPGLGKDFKSPHLNYYWLPIMTSILGAYVIASGFFSVFGMCVDTLFLCFLEDLERNNGSLDRPYYMSKSLLKILGKKNEAPPDNKKR 708
The following BLAST results are available for this feature:
BLAST of TCONS_00058820-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTL40.000e+042.66Choline transporter-like protein 4 OS=Homo sapiens... [more]
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