TCONS_00060402-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00060402-protein
Unique Name	TCONS_00060402-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	319

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00060402-protein ID=TCONS_00060402-protein|Name=TCONS_00060402-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MSKAMVNMSTEQLTVDSSGKSGSGRKNMILMIVLVLVVVLAIIFVALYAS
SNKKNGNLKVEIGKLNNELKDMKKGGSNKTTMAPTTVPTTPGTEVYHNIR
LPKYIRPIHYVVALEIDMQLEFVDGTTNIKTEVSKRSKYIMVHAMKFNNV
KVVVKKFDTQEKYPLEKEHGDNGGFLYKQNLYFVIEAHDYFEVGNYSLEF
KFDYKLRKDLAGFYLSTYNNTKGQIVKVAATQFEPVDARSAFPCFDEPAM
KATFDISMKRDKSYLALSNMPVIRTEADGDEVTNYFQTTPIVSTYLIVFV
ICDFEKRMVVANTKVPTNV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037994	XLOC_037994	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00060402	TCONS_00060402	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014782	Peptidase_M1_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0008237	metallopeptidase activity
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014782	Peptidase M1, membrane alanine aminopeptidase, N-terminal	PRINTS	PR00756	ALADIPTASE	coord: 239..254 score: 68.75 coord: 286..301 score: 41.96
None	No IPR available	GENE3D	2.60.40.1730		coord: 86..304 e-value: 1.6E-44 score: 151.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	SUPERFAMILY	63737	Leukotriene A4 hydrolase N-terminal domain	coord: 96..303

Blast

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BLAST of TCONS_00060402-protein vs. Swiss-Prot (Human)
Match: ERAP1 (Endoplasmic reticulum aminopeptidase 1 OS=Homo sapiens GN=ERAP1 PE=1 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 3.664e-32
Identity = 75/230 (32.61%), Postives = 128/230 (55.65%), Query Frame = 0

Query:   96 YHNIRLPKYIRPIHYVVALEIDMQLEFVDGTTNIKTEVSKRSKYIMVHAMKFNNVKVVVKKFDTQE--KYPLE-KEHGDNGGFLYKQNLYFVIEAHDYFEVG-NYSLEFKFDYKLRKDLAGFYLSTYNNTKGQIVKVAATQFEPVDARSAFPCFDEPAMKATFDISMKRDKSYLALSNMPVIR--TEADGDEVTNYFQTTPIVSTYLIVFVICDFEKRMVVANTKVPTNV 319
            ++ IRLP+Y+ P+HY + +  ++      GTT ++   S+ +  I++H+      +  ++K   +   + PL+  EH         +     + A +   VG  Y++   +   L +   GFY STY   +G++  +A+TQFEP  AR AFPCFDEPA KA+F I ++R+  +LA+SNMP+++  T A+G  + ++F  T  +STYL+ F+I DFE    +  + V  +V
Sbjct:   49 WNKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAGERLSEEPLQVLEH--------PRQEQIALLAPEPLLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEG-LIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSV 269

The following BLAST results are available for this feature:

BLAST of TCONS_00060402-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00060402-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ERAP1	3.664e-32	32.61	Endoplasmic reticulum aminopeptidase 1 OS=Homo sap...	[more]

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TCONS_00060402-protein (polypeptide) - C. hemisphaerica