TCONS_00061105-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061105-protein
Unique NameTCONS_00061105-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length363

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061105-protein ID=TCONS_00061105-protein|Name=TCONS_00061105-protein|organism=Clytia hemisphaerica|type=polypeptide|length=363bp
MGDLAKKYNLKSPAVKRLMREAAELSEPTDQYFAQPLDDNLFEWHFTVRG
PPDTEFDDGRYHGRITLPPEYPMKPPSIILLTPNGRFEIGKKICLSMSAH
HPETWQPSWSIRTVLLALIGFMPTPGGGAIGALDHTPEERKVMAKRSKTW
TCEACGSNNEASLLERDPTKEKEETEEVKELASQINFKGEDKSKQSAATP
TQSQTTTTTSQSAINNSQQQAAAAQMSQMYANYNQFYGMQQQQQNPMFAN
QQFQQPSQQQTPSSQPTTTETTTTQSSAQPNTGSTETTTNENTDTTNLRQ
RRQGADSSRSSSPATTPTPTHNQTQGQSKLETVSFYMLWIVLVPLVLLIL
RRLGMENSGMGKH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038339XLOC_038339Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061105TCONS_00061105Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 16..156
e-value: 8.7E-29
score: 111.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..327
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 17..125
e-value: 1.6E-17
score: 63.4
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 16..125
score: 23.345
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 15..125
e-value: 3.09399E-43
score: 147.349
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 3..245
e-value: 2.0E-45
score: 154.7
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 14..156

Blast
[Close]
BLAST of TCONS_00061105-protein vs. Swiss-Prot (Human)
Match: UB2J1 (Ubiquitin-conjugating enzyme E2 J1 OS=Homo sapiens GN=UBE2J1 PE=1 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 1.743e-99
Identity = 148/256 (57.81%), Postives = 180/256 (70.31%), Query Frame = 0 
Query:    7 KYNLKSPAVKRLMREAAELSEPTDQYFAQPLDDNLFEWHFTVRGPPDTEFDDGRYHGRITLPPEYPMKPPSIILLTPNGRFEIGKKICLSMSAHHPETWQPSWSIRTVLLALIGFMPTPGGGAIGALDHTPEERKVMAKRSKTWTCEACGSNNEASLLE-RDPTKEKEETEEVKELASQINFKGEDKSKQSAATPTQSQTTTTTSQSAINN---SQQQAAAAQMSQMYANYNQFYGMQQQQQNPMFANQQFQQPSQ 258
            +YNLKSPAVKRLM+EAAEL +PTD Y AQPL+DNLFEWHFTVRGPPD++FD G YHGRI LPPEYPMKPPSIILLT NGRFE+GKKICLS+S HHPETWQPSWSIRT LLA+IGFMPT G GAIG+LD+TPEER+ +AK+S+ + CE CGS  +  LL  +  +   +  +E KELA QI+FK E  S  S  T ++S    + S + + +   +  Q A A  S         YG+Q        +   F QP+Q
Sbjct:    4 RYNLKSPAVKRLMKEAAELKDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQDFCCEGCGSAMKDVLLPLKSGSDSSQADQEAKELARQISFKAEVNS--SGKTISESDLNHSFSLTDLQDDIPTTFQGATASTS---------YGLQNS------SAASFHQPTQ 242
The following BLAST results are available for this feature:
BLAST of TCONS_00061105-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UB2J11.743e-9957.81Ubiquitin-conjugating enzyme E2 J1 OS=Homo sapiens... [more]
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