TCONS_00061929-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061929-protein
Unique Name	TCONS_00061929-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1077

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061929-protein ID=TCONS_00061929-protein|Name=TCONS_00061929-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1077bp
MSSEDLSNGTGVVNGGLEIDSMVPSSKIDGVPRFRISKTPAANDVTDMLD
AASKQNGTMPPSIMTPGIEKADDAVQETPASPTEKQEKHVHLYLPTDHND
TLQHNRTHTNTQTMGYLTHDAVPLSVFYRNQESMENIAGGKRPTLDQLHK
GEGLEHAKKRHWDASKTVEPVKGISDIESTGENKKGAVKLGWIKGVLFPT
LLNIWGVILFLRMPWIVANAGIGLSSVVVILATCVTTITALSMSAICTNG
EVKGGGAYFLISRSLGPEFGGSIGIIFSIANAVAVALYLVGFGETVQALM
GKDGIFMVDVKNDVRIIGLIALVLCFIITQVGLDWVIHTQSGLLALLGAA
IISVIAGTAYPNPQSSRDTMEQYGLPGYSGELFKTNFGPDYENGVGFFDV
FSIFFPAATGIMAGANLSGDLKNPSQAVPWGTLIAIVVTSAVYVLLCWLL
GSSTMRFAQGPISLMASGLNDTLNNTLSNSTTTTTTVTTTLANVEDYEFG
ARNDLQIIERISLWGPLVLIGIFAATLSSALASLVSAPKVFQAVSKDKIF
PGIEIFAKGYGRSNEPRNGYFLTLIIAAGFIAIGELNVIAPIISNFFLMA
YALINYAVFASSLSKSPGWRPAFKYYNMWISFIGFLLCMAIMFMINWWAA
LITLLAVAGLYKWVDVRKPDINWGSSGQAHTFLKALRFTRRLEEIEDHVK
NFRIQCLCLTGQPSLRPNLVHFASHITKHLGMLVCGEVVITDKISQTTQH
NEAKWLKKHKVKAFHQIVQNTTLRGGVNSMLQTLGLGKLRPNTLLLGYMN
CWQNADSSKVDEFYNMLHDAFDLKYGVGILRLQDGFDITDGIVDDQIENG
VVDNHEPDWYTEDWDESQKQQNPDNQQGSDNSSDPGKDGSRLKESELPNI
VMAFDKKRKGYIDVWWLYDDGGLTILLPHLLSLSTHWRGCKLRIFTPASD
KKIKANQIRMANLLKKFRIDFSSVVEFRGINKHPRDDSVTHFKRMRGGAH
LPPDGVLDKKTLRQIRLGELLHEHSSEAKLIVLTLPIPKKSVVTSLMYMS
WLEVLSADLPPIMMVRGNQTSVLTFYS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038830	XLOC_038830	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061929	TCONS_00061929	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004841	AA-permease/SLC12A_dom
IPR018491	SLC12_C
IPR013612	AA_permease_N

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport
GO:0055085	transmembrane transport
GO:0006811	ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006810	transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004841	Amino acid permease/ SLC12A domain	PFAM	PF00324	AA_permease	coord: 195..707 e-value: 2.0E-99 score: 333.3
IPR018491	SLC12A transporter, C-terminal	PFAM	PF03522	SLC12	coord: 867..995 e-value: 1.1E-34 score: 120.2 coord: 1007..1077 e-value: 4.8E-35 score: 121.3 coord: 716..877 e-value: 1.1E-46 score: 159.7
IPR013612	Amino acid permease, N-terminal	PFAM	PF08403	AA_permease_N	coord: 109..150 e-value: 4.9E-5 score: 22.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 863..892

Blast

[Close]

BLAST of TCONS_00061929-protein vs. Swiss-Prot (Human)
Match: S12A2 (Solute carrier family 12 member 2 OS=Homo sapiens GN=SLC12A2 PE=1 SV=1)

HSP 1 Score: 855.514 bits (2209), Expect = 0.000e+0
Identity = 479/1031 (46.46%), Postives = 650/1031 (63.05%), Query Frame = 0

Query:  107 THTNT---QTMGYLTHDAVPLSVFYRNQESMENIAGGK--RPTLDQLH---KGEGLEHAKKRHWDASKTVEPVKGISDIESTGENKKGAVKLGWIKGVLFPTLLNIWGVILFLRMPWIVANAGIGLSSVVVILATCVTTITALSMSAICTNGEVKGGGAYFLISRSLGPEFGGSIGIIFSIANAVAVALYLVGFGETVQALMGKDGIFMVDVKNDVRIIGLIALVLCFIITQVGLDWVIHTQSGLLALLGAAIISVIAGTAYPNPQSSRDTMEQYGLPGYSGELFKTNFGPDYENGVGFFDVFSIFFPAATGIMAGANLSGDLKNPSQAVPWGTLIAIVVTSAVYVLLCWLLGSSTMRFAQGPISLMASGLNDTLNNTLSNSTTTTTTVTTTLANVED--YEFGARNDLQIIERISLWGPLVLIGIFAATLSSALASLVSAPKVFQAVSKDKIFPGIEIFAKGYGRSNEPRNGYFLTLIIAAGFIAIGELNVIAPIISNFFLMAYALINYAVFASSLSKSPGWRPAFKYYNMWISFIGFLLCMAIMFMINWWAALITLLAVAGLYKWVDVRKPDINWGSSGQAHTFLKALRFTRRLEEIEDHVKNFRIQCLCLTGQPSLRPNLVHFASHITKHLGMLVCGEVVITD-----KISQTTQHNEAKWLKKHKVKAFHQIVQNTTLRGGVNSMLQTLGLGKLRPNTLLLGYMNCWQNADSSKVDEFYNMLHDAFDLKYGVGILRLQDGFDIT-----DGIVDDQIEN-GVVDNHEPDWYTE--DWDESQK-QQNPDNQQGSDNSSDPGKDGSRLKESELPNIVM------------AFDKKR-KGYIDVWWLYDDGGLTILLPHLLSLSTHWRGCKLRIFTPASDKKIKANQIRMANLLKKFRIDFSSVVEFRGINKHPRDDSVTHFKRMRGGAHLPPDG----VLDK-------------------KTLRQIRLGELLHEHSSEAKLIVLTLPIPKKSVVTSLMYMSWLEVLSADLPPIMMVRGNQTSVLTFYS 1077
            THTNT   +T G+ T DAVP    YR+  +     G K  RP+L +LH   + E  E       +++ T + V     +  T E+K G VK GWIKGVL   +LNIWGV+LF+R+ WIV  AGIGLS +V+++AT VTTIT LS SAI TNG V+GGGAY+LISRSLGPEFGG+IG+IF+ ANAVAVA+Y+VGF ETV  L+ +  I M+D  ND+RIIG I +V+   I+  G++W    Q  LL +L  AI   + GT  P      ++ +  G  GY  E+F  NFGPD+     FF VF+IFFPAATGI+AGAN+SGDL +P  A+P GTL+AI++T+ VYV +   +GS  +R A G        +NDT+   L+N T+    +    ++ E     +G  N+ Q++  +S + PL+  GIF+ATLSSALASLVSAPK+FQA+ KD I+P  ++FAKGYG++NEP  GY LT +IA GFI I ELNVIAPIISNFFL +YALIN++VF +SL+KSPGWRPAFKYYNMWIS +G +LC  +MF+INWWAAL+T + V GLY +V  +KPD+NWGSS QA T+L AL+ + RL  +EDHVKNFR QCL +TG P+ RP L+H     TK++G+++CG V +       K     Q    +WL K+K+KAF+  V    LR G   ++Q  GLG+++PNTL+LG+   W  AD   VD + N+ HDAFD++YGV ++RL++G DI+     + ++  Q ++ G  D      Y++  D D S+   + P   +  +            KES+ P + +             F KK+ K  IDVWWL+DDGGLT+L+P+LL+    W+ CK+R+F      +I  ++  MA LL KFRIDFS ++    IN  P+ +++  F+ +     L  D     + DK                   KT RQIRL ELL EHSS A +IV++LP+ +K  V+S +YM+WLE LS DLPPI++VRGN  SVLTFYS
Sbjct:  203 THTNTYYLRTFGHNTMDAVPRIDHYRHTAAQ---LGEKLLRPSLAELHDELEKEPFEDGFANGEESTPTRDAV-----VTYTAESK-GVVKFGWIKGVLVRCMLNIWGVMLFIRLSWIVGQAGIGLSVLVIMMATVVTTITGLSTSAIATNGFVRGGGAYYLISRSLGPEFGGAIGLIFAFANAVAVAMYVVGFAETVVELLKEHSILMIDEINDIRIIGAITVVILLGISVAGMEWEAKAQIVLLVILLLAIGDFVIGTFIP-----LESKKPKGFFGYKSEIFNENFGPDFREEETFFSVFAIFFPAATGILAGANISGDLADPQSAIPKGTLLAILITTLVYVGIAVSVGSCVVRDATG-------NVNDTIVTELTNCTSAACKLNFDFSSCESSPCSYGLMNNFQVMSMVSGFTPLISAGIFSATLSSALASLVSAPKIFQALCKDNIYPAFQMFAKGYGKNNEPLRGYILTFLIALGFILIAELNVIAPIISNFFLASYALINFSVFHASLAKSPGWRPAFKYYNMWISLLGAILCCIVMFVINWWAALLTYVIVLGLYIYVTYKKPDVNWGSSTQALTYLNALQHSIRLSGVEDHVKNFRPQCLVMTGAPNSRPALLHLVHDFTKNVGLMICGHVHMGPRRQAMKEMSIDQAKYQRWLIKNKMKAFYAPVHADDLREGAQYLMQAAGLGRMKPNTLVLGFKKDWLQADMRDVDMYINLFHDAFDIQYGVVVIRLKEGLDISHLQGQEELLSSQEKSPGTKDVVVSVEYSKKSDLDTSKPLSEKPITHKVEEEDGKTATQPLLKKESKGPIVPLNVADQKLLEASTQFQKKQGKNTIDVWWLFDDGGLTLLIPYLLTTKKKWKDCKIRVFIGGKINRIDHDRRAMATLLSKFRIDFSDIMVLGDINTKPKKENIIAFEEIIEPYRLHEDDKEQDIADKMKEDEPWRITDNELELYKTKTYRQIRLNELLKEHSSTANIIVMSLPVARKGAVSSALYMAWLEALSKDLPPILLVRGNHQSVLTFYS 1212

The following BLAST results are available for this feature:

BLAST of TCONS_00061929-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061929-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S12A2	0.000e+0	46.46	Solute carrier family 12 member 2 OS=Homo sapiens ...	[more]

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TCONS_00061929-protein (polypeptide) - C. hemisphaerica