TCONS_00062043-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062043-protein
Unique NameTCONS_00062043-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length927

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062043-protein ID=TCONS_00062043-protein|Name=TCONS_00062043-protein|organism=Clytia hemisphaerica|type=polypeptide|length=927bp
MGSPKRKPLMRGPPRGPFNGPFRPRGPPPPGFRGPRGMPPQDWGPMGPPP
GMFRPPFRGRGPPPPDWRGPPPFLGPRGPPGEFDKFGPHDDFGPRGMPPD
FRGPRPDMMGGPRPFGVRPPGDGGFPHMDPNFNPQLPGQKPKKKKKHKKK
KKSSKVEEAKFPTQKKEKSDKKEDKEDNEDSEVDEDKLLASDDDDESTSS
SSSSESEEEQDQNQNRNIPQLPMQGGGHRHPGPFNNQPMNPNFQPPFHHN
NNNQQPFHGNRFPQNQQNQQHQQRPPLLPQQQIQQQQRPQIVQSLPPGAV
VVNNPHQNVQQQIQRLVQPGQVLVRQVVPGQAQPVIRAMSLPAGAQQIVA
RPRLPQGGQIIQQGSLPPGAIVVQRPPFNSTPATNLPVGAHQLNKSNVVQ
IGPNGQIIQQSPGLPTQRPSLVNPGLPAQIRPGSSPVVLPPGVQPPGQPQ
NLNATLQASQALILQQQQQLAAVQQQQLAIQQQQQQQQQIIQQQQTTSNP
PEFVDRRQGNEKYSRNNERGNNRRRASEYGRGRPRYNNRSRSRSFSRSRS
GSWTGSESGSRTGSSRSRSRSMSGSSRSRSWSSEGSRSPTPERQHHNNTR
RDNFHNNKHDNQFRNNDNRGGGFGRQNSQNHPQQHHQPPHLHNNNQRKNF
HHNNQFNPHHHNNKQHRGQPPQPPPQPPQPPQPPPSTFTTEQEARFEELE
RQRXGQPPQPPPQPPQPPQPPPSTFTTEQEARFEELERQRLKERERRDRE
REERQQREQQRNEQREQREQQRSEQREQRNERDYGRRRRGDDHHRDQEMR
DHQSHDNRHRRDDRKESSSSKRGGKTDRGDRGEHSSSKDQQNSSSRASTS
TSVDVGNRVLISQLPPNMSERKLKQMMQSVGDVENLKLSTTRHKALVAFT
KRSFAVSCRKKFHKATVDDCKLLVEFA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038884XLOC_038884Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062043TCONS_00062043Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 726..781
NoneNo IPR availableCOILSCoilCoilcoord: 456..493
NoneNo IPR availableGENE3D3.30.70.330coord: 785..927
e-value: 1.5E-15
score: 56.8
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 858..925
e-value: 2.3E-6
score: 37.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 859..922
e-value: 4.0E-8
score: 32.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 857..927
score: 10.07
IPR000504RNA recognition motif domainSUPERFAMILY54928RNA-binding domain, RBDcoord: 842..927

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062043-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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