TCONS_00062091-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062091-protein
Unique NameTCONS_00062091-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length130

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062091-protein ID=TCONS_00062091-protein|Name=TCONS_00062091-protein|organism=Clytia hemisphaerica|type=polypeptide|length=130bp
MLIILRMVLILMLIENVSCWCKAVDCEMTEWTKWSLCDKSCGGGLRMRFR
YPRVHPQCNGVKCPVLNIKRGQCNSKCCPIDCRYGPWIKRGQCQGCGRNG
SQTLERKVISRESCGGRCDKLLVKNTKCDA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038914XLOC_038914Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062091TCONS_00062091Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 28..79
e-value: 6.7E-9
score: 45.6
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 30..78
e-value: 4.0E-6
score: 26.8
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 22..79
e-value: 2.4E-10
score: 40.2
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 25..79
score: 10.132
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 24..74
NoneNo IPR availableGENE3D2.30.90.10coord: 82..128
e-value: 0.25
score: 11.4

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062091-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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