TCONS_00062122-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062122-protein
Unique NameTCONS_00062122-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length301

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062122-protein ID=TCONS_00062122-protein|Name=TCONS_00062122-protein|organism=Clytia hemisphaerica|type=polypeptide|length=301bp
MMQTWILINFGAWLLFQFTQVSTAAVVISNDDLKRMVLKLQKEITDLKER
EKKPLGYCAQNKCGKCQCLEDLTIPDRHYCDCRALPPKRDCKEFYLKGNY
VAGIYTVTMDGLRSTNVFCDGNGWTVIQRRMDGSTNFYRSWEQYKQGFGK
LQGEFWIGNENLYALSTQALYPKGSELKITMKSPHSWDLKYMAFYKHFAI
DSEAANYKLHIKYSFGNGDSLSYHDNMEFSTFDRDNDRHATKNCARDLHG
AWWYNACAESNLNGFYDTRENGKAASKVDWSSLLFYRTQAWVEMKVMRMT
A
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038945XLOC_038945Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062122TCONS_00062122Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
IPR020837Fibrinogen_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..50
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 86..299
e-value: 6.1E-60
score: 215.1
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 88..299
e-value: 8.7E-52
score: 176.0
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 82..300
score: 45.089
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 86..299
e-value: 2.19967E-83
score: 251.776
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 82..280
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 230..292
e-value: 1.1E-22
score: 79.5
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 25..229
e-value: 3.4E-51
score: 173.4
IPR020837Fibrinogen, conserved sitePROSITEPS00514FIBRINOGEN_C_1coord: 252..264

Blast
[Close]
BLAST of TCONS_00062122-protein vs. Swiss-Prot (Human)
Match: FCN1 (Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.206e-45
Identity = 92/218 (42.20%), Postives = 126/218 (57.80%), Query Frame = 0 
Query:   89 RDCKEFYLKGNYVAGIYTVTMDGLRSTNVFCD----GNGWTVIQRRMDGSTNFYRSWEQYKQGFGKLQGEFWIGNENLYALSTQALYPKGSELKITM---KSPHSWDLKYMAFYKHFAIDSEAANYKLHIKYSFGN--GDSLSYHDNMEFSTFDRDNDRHATKNCARDLHGAWWYNACAESNLNGFYDTRENGKAASKVDWSSLLFYRTQAWV-EMKV 296
            R+CK+   +G +++G +T+ +   R   V CD    G GWTV QRRMDGS +FYR W  YKQGFG   GEFW+GN+N++AL+ Q      SEL++ +   +  H +     A YK F +  EA  YKL +    G   G+SL+ H+N  FST D+DND  ++ NCA    GAWWY  C  SNLNG Y    +   A+ ++WS+   Y+    V EMKV
Sbjct:  116 RNCKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFGSQLGEFWLGNDNIHALTAQG----SSELRVDLVDFEGNHQF-----AKYKSFKVADEAEKYKLVLGAFVGGSAGNSLTGHNNNFFSTKDQDNDV-SSSNCAEKFQGAWWYADCHASNLNGLYLMGPHESYANGINWSAAKGYKYSYKVSEMKV 323
The following BLAST results are available for this feature:
BLAST of TCONS_00062122-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN11.206e-4542.20Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2[more]
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