TCONS_00062195-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062195-protein
Unique NameTCONS_00062195-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length363

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062195-protein ID=TCONS_00062195-protein|Name=TCONS_00062195-protein|organism=Clytia hemisphaerica|type=polypeptide|length=363bp
RITTCGNLENGGIEFCVAEKTKRKLKMESKATFDEFAHALKQEIDAIQCK
KVSCEEIVPEDYNKQTHWQKMDLCCELIAKECTKMALAFSKPPYPPKEDS
MLLLRDVSKSVDMLLAWYKCFPLDEGQLLHDVLEKCVLSVLTSVASFTDS
TLNMRKSDSMISTGSVWEHCKQFKSLPDDNIKVALSGINSSYSLITDAIE
EIHQTIRDHDQDLLDDIDDDDAEDDFNEKWTEDDKNLMKPVLGLLMASKC
LLKKIKSALNKIQVGKNSNIPSTIGSMNKEIDRLVLDHIQHISPSVDDLV
MVIYPPLQRKDLHNFTNKLTDLLKKTLEFLRNSSLGTDADNQTWIDFIHK
AVDHNLEKLNQLL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038995XLOC_038995Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062195TCONS_00062195Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 349..363
NoneNo IPR availablePFAMPF13324GCIPcoord: 76..327
e-value: 9.8E-47
score: 159.7

Blast
[Close]
BLAST of TCONS_00062195-protein vs. Swiss-Prot (Human)
Match: CCDB1 (Cyclin-D1-binding protein 1 OS=Homo sapiens GN=CCNDBP1 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 2.672e-36
Identity = 86/321 (26.79%), Postives = 162/321 (50.47%), Query Frame = 0 
Query:   60 EDYNKQTHWQKMDLCCELIAKECTKMALAFSKPPYPPKEDSMLLLRDVSKSVDMLLAWYKCFPLDEGQLLHDVLEKCVLSVLTSVASFTD----STLNMRKSDSMISTGSVWEHCKQFKSLPDDNIKVALSGINSSYSLITDAIEEIHQTIRDHD--QDLLDDIDDDDAEDDFNE------------KWTEDDKNLMKPVLGLLMASKCLLKKIKSALNKIQVGKNSNIPSTIGSMNKEIDRLVLDHIQHISPSVDDLVMVIYPPLQRKDLHNFTNKLTDLLKKTLEFLRNSSLGTDADNQTWIDFIHKAVDHNLEKLNQL 362
            E++N++  W++++     +++E T + + FS+ P P  +++      V  ++   +A Y   P D+G  L  ++    L ++  +A   +    +     +++ +IS  SVW  C+Q   +P DN   AL  +  +   + DA EE+ Q + + D    LL+D +++++++  +E             W+EDD+ L+ P L L+ ASK  LKKI+  +   + GK   +         ++D +V D    ISPSVDDL + IYPP+    +   + KL  +LKK LE  + S +    ++ +WI  +  A+DH + ++ +L
Sbjct:   45 EEFNREMFWRRLNEAAVTVSREATTLTIVFSQLPLPSPQETQKFCEQVHAAIKAFIAVYYLLPKDQGITLRKLVRGATLDIVDGMAQLMEVLSVTPTQSPENNDLISYNSVWVACQQMPQIPRDNKAAALLMLTKNVDFVKDAHEEMEQAVEECDPYSGLLNDTEENNSDNHNHEDDVLGFPSNQDLYWSEDDQELIIPCLALVRASKACLKKIRMLV--AENGKKDQV--------AQLDDIV-DISDEISPSVDDLALSIYPPMCHLTVRINSAKLVSVLKKALEITKASHVTPQPED-SWIPLLINAIDHCMNRIKEL 353
The following BLAST results are available for this feature:
BLAST of TCONS_00062195-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCDB12.672e-3626.79Cyclin-D1-binding protein 1 OS=Homo sapiens GN=CCN... [more]
back to top