TCONS_00062547-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062547-protein
Unique NameTCONS_00062547-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1050

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062547-protein ID=TCONS_00062547-protein|Name=TCONS_00062547-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1050bp
MAELLTEMVVEEKIAPNELSRASPFMVADVGDEQTIHEIEVENLNEGDVS
MDAPSNDIEILTTLLSINNTTTDDPSEHVMTNTLEEMNELLEEYYTRTSN
RFAIVNYKGMKDSLDEIDFSHHKIFWEDLSASNSSLVYDGVPFIIYGRII
LCCQFGSDQNLSSKRKNAAKRKESENTGEKRTGRKRGTKKCGCPAQIVVR
RIIKFPGFKLKKEQDTVRRRKTFSKTLKEKLKENSKDVEMRNLFLGILPP
VSRHCFHENIKCTVEPIDKEIILKIQELTLKNIPTHDVMKEIEIMVCDEL
FYMKLPPDRTRRRYFPSIRDVRNIMHNTKEAAKILQSHIRELKDYFGTLL
QKRGTVLYFNFDGDGLLLEQSADKKADNDLKEGKTKPDNIQEFVLFHQSP
QQQYLLNRYGSIVFITEVQPTETGTRALTVRLFLMXYGSIVFITEVQPTE
TGTRALTVRLFLMLVRTNVDYQVVGTILMDRFNGNGLHEGLVKCRETNEA
WMPRYFMVDLNEELLLSVRDLFPESDYFVTKSSCNEIWRKFLSKPSNGVS
QEASQILNYLNAMRVSATKDELTYAASALEQSEIWTQCENLRNWFQGSWL
PIAEKWVREYLPDDLRCYVQDTSGENVMKIYQDMLMRTTQRNKEGCIVDL
VKKLTSELLDTHFESYVTLNREHYHNCKQLKKLNPAWEFEFALPLSLYSH
VVPVIESLDGVVSVANQTSYGNFEVSVNSCAENGETLNEFFTVDLGNSLK
LPSCTCAKWRMSCLPCSHMLTVFKNFPLTKYDALSPLYRSSPIFAFDYSC
FGNEFYVKPVSVSTQTTSTISTQVSNKVQARPAKIPLSITVKNSKEKVKR
VVKTDKVVKIVEQIPTHSPQKRKSLLVASEIPLVKVKVKSIKDILTEMPK
ETIEQFKRSLRNRSTKDNQDEVRNEESLVDQSNELPESSTTDEIQYAVNK
NTILQIEELILPREETISGEESSNENNDETQTMKEPQLKLMMKLLEDHQS
ISEPIAEDNDTDTGVEDHAELSIATKRKCNDPYGDGKSDASLTSKKMKGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039187XLOC_039187Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062547TCONS_00062547Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006564Znf_PMZ
IPR029309CaRF
IPR007527Znf_SWIM
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006564Zinc finger, PMZ-typeSMARTSM0057526again6coord: 752..779
e-value: 0.0055
score: 22.0
IPR029309Calcium-responsive transcription factorPFAMPF15299ALS2CR8coord: 120..331
e-value: 2.1E-42
score: 145.4
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 741..777
score: 9.792

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062547-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top