TCONS_00062657-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062657-protein
Unique NameTCONS_00062657-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length273

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062657-protein ID=TCONS_00062657-protein|Name=TCONS_00062657-protein|organism=Clytia hemisphaerica|type=polypeptide|length=273bp
NGHPSKDPYFAFSSKFKEQCISVCGTTRKCHSYTIKQTSSNQYECQFYDS
ATMREDLVRVSFRICYFINARNCKDWYSIGARASGVYKVNWMGRFLKDIR
CNMDIEGGGWIVFQRRYQPRPVDFQRSWNDYKVGFGDPHREFWLGNDFIH
EMSISAKHDFLVHAEAYTGETLISRYGEFYIDNESQDYTLHFNETLLTGI
ESLTGPQNLNGKKFHTHDRSYGSTCITRGHGPFWLNDCMYLDPNHPNFLR
WRTYVDSDAIQEIQLMFKATSQN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039269XLOC_039269Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062657TCONS_00062657Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 68..270
e-value: 3.0E-14
score: 53.3
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 70..245
e-value: 7.5E-36
score: 123.9
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 64..271
score: 27.412
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 64..246
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 215..260
e-value: 6.3E-4
score: 19.3
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 65..214
e-value: 7.5E-39
score: 133.2

Blast
[Close]
BLAST of TCONS_00062657-protein vs. Swiss-Prot (Human)
Match: FCN3 (Ficolin-3 OS=Homo sapiens GN=FCN3 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.527e-25
Identity = 65/173 (37.57%), Postives = 92/173 (53.18%), Query Frame = 0 
Query:   71 RNCKDWYSIGARASGVYKVNWM-GRFLKDIRCNMDIEGGGWIVFQRRYQPRPVDFQRSWNDYKVGFGDPHREFWLGNDFIHEMSISAKHDFLVHAEAYTGETLISRYGEFYIDNESQDYTLHFNE-TLLTGIESLTGPQNLNGKKFHTHDR---SYGSTCITRGHGPFWLNDC 238
            RNC++  S GA  SG Y +    GR L  + C+MD EGGGW+VFQRR Q   VDF RSW+ Y+ GFG+   EFWLGN+ +H++++    +  V  E + G    + Y  F +  E   Y L   + +  T  +SL+     +G+ F T+D    S  S C    HG +W   C
Sbjct:   91 RNCRELLSQGATLSGWYHLCLPEGRALP-VFCDMDTEGGGWLVFQRR-QDGSVDFFRSWSSYRAGFGNQESEFWLGNENLHQLTLQGNWELRVELEDFNGNRTFAHYATFRLLGEVDHYQLALGKFSEGTAGDSLS---LHSGRPFTTYDADHDSSNSNCAVIVHGAWWYASC 258
The following BLAST results are available for this feature:
BLAST of TCONS_00062657-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN31.527e-2537.57Ficolin-3 OS=Homo sapiens GN=FCN3 PE=1 SV=2[more]
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