TCONS_00063777-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00063777-protein
Unique Name	TCONS_00063777-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	395

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00063777-protein ID=TCONS_00063777-protein|Name=TCONS_00063777-protein|organism=Clytia hemisphaerica|type=polypeptide|length=395bp
MATKSRRFFDRCQILFIIFLLLPHPLGHAFTHWALEDGIIKYQEESLYTL
HSPGDLLLFIAQAKAADELRSLEKKSADLMRQQKLLRSVEIERLDRERLA
FFSDPDCRITQKKLSDFDLYLSSFLRLEAKKIKIEDFADYKVQLPEDKEK
FTKPYCNSEFAFSMHSYDHLKGVGDRKLLINASEAGLVNPIPHAKKLEEF
GHRINVALEKNETSWVLLNFASIYWRVAGNAYYAVECLRRALHYSPRKHK
DLALVSLANILHRSKYSLDAAILMHAALEMTTDYDIVYFTLGNIYGALGQ
FDLADICYKYVSDLQPAFEAARLRMHAARCEFKLGSPLENPKFQDDIDEL
EEMVGKQQLIEDTHKGHLADRSSPLRKYNMYSDIQPPAHERGDYI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_039990	XLOC_039990	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00063777	TCONS_00063777	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom
IPR013026	TPR-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 62..92
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 51..334 e-value: 2.9E-13 score: 49.0
IPR011990	Tetratricopeptide-like helical domain	SUPERFAMILY	48452	TPR-like	coord: 202..334
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 214..318 score: 11.147

Blast

[Close]

BLAST of TCONS_00063777-protein vs. Swiss-Prot (Human)
Match: TTC17 (Tetratricopeptide repeat protein 17 OS=Homo sapiens GN=TTC17 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.125e-57
Identity = 134/356 (37.64%), Postives = 199/356 (55.90%), Query Frame = 0

Query:   29 AFTHWAL-EDGIIKYQEESLYTLHSPGDLLLFIAQAKAADELRSLEKKSADLMRQQKLLRSVEIERLDRERLAFFSDPDCRITQKKLSDFDLYLSSFLRLEAKKIKIEDFADYKVQLPEDKEKFTKPYCNS--EFAFSMHSYDHLKGVGDRKLLINASEAGLVNPIP--------HAKKLEEFGHRINVALEKNETSWVLLNFASIYWRVAGNAYYAVECLRRALHYSPRKHKDLALVSLANILHRSKYSLDAAILMHAALEMTTDYDIVYFTLGNIYGALGQFDLADICYKYVSDLQPAFEAARLRMHAARCEFKLGSPLE--NPKFQDDIDELEEMVG------KQQLIEDTHK 365
            A THW + EDG I+ Q +S   L  P DL++ + Q    + L+ LEK+   L+ Q+  +   E      E+     DPDC   +  L D DLY  +++ LE+K I  ED+ D +  +P D E+   P C    E  +S+H++ HL+GV +R   +N S   L    P          + +++ GH I+  L+KN +SWVL N AS YWR+    Y  VEC  RALH+S R +KD+ALV+LAN+LHR+ +S DAA+++HAAL+  +D+   Y+TLGNIY  LG+++ + +CY +    +P FE A  R HA  C+ KL   LE  +   Q  ++EL+E         +QQ I + HK
Sbjct:   38 ATTHWVVTEDGKIQQQVDSPMNLKHPHDLVILMRQEATVNYLKELEKQ---LVAQKIHIEENEDRDTGLEQRHNKEDPDCIKAKVPLGDLDLYDGTYITLESKDISPEDYIDTESPVPPDPEQ---PDCTKILELPYSIHAFQHLRGVQER---VNLSAPLLPKEDPIFTYLSKRLGRSIDDIGHLIHEGLQKNTSSWVLYNMASFYWRIKNEPYQVVECAMRALHFSSRHNKDIALVNLANVLHRAHFSADAAVVVHAALD-DSDFFTSYYTLGNIYAMLGEYNHSVLCYDHALQARPGFEQAIKRKHAVLCQQKLEQKLEAQHRSLQRTLNELKEYQKQHDHYLRQQEILEKHK 383

HSP 2 Score: 168.703 bits (426), Expect = 9.109e-46
Identity = 91/257 (35.41%), Postives = 144/257 (56.03%), Query Frame = 0

Query:   92 ERLDRERLAFFSDPDCRITQKKLSDFDLYLSSFLRLEAKKIKIEDFADYKVQLPEDKEKFTKPYCNSEFAFSMHSYDHLKGVGDRKLLINASEAGLVNPIPHAKK-------LEEFGHRINVALEKNETSWVLLNFASIYWRVAGNAYYAVECLRRALHYSPRKHKDLALVSLANILHRSKYSLDAAILMHAALEMTTDYDIVYFTLGNIYGALGQFDLADICYKYVSDLQPAFEAARLRMHAARCEFKLGSPLENP 341
            ++ D +RL + S  +C   + +  +    +S++L + +K I I +  D+   +   ++   +P CN     SMH+ DHL GV +R  L    E+ L   + +  K       LE+ G RI   LEKN+TSWVL + A++YWRV G    A++CLR+ALHY+P + KD+ L+SLANILH +K   DA I+   A+E+   + + +FTLGN+Y A+ +F+ A + Y+    LQP F  A+ R+   +C   L     +P
Sbjct:  890 KKRDYQRLGWPSPDEC--LKLRWVELTAIVSTWLAVSSKNIDITEHIDFATPI---QQPAMEPLCNGNLPTSMHTLDHLHGVSNRASLHYTGESQLTEVLQNLGKDQYPQQSLEQIGTRIAKVLEKNQTSWVLSSMAALYWRVKGQGKKAIDCLRQALHYAPHQMKDVPLISLANILHNAKLWNDAVIVATMAVEIAPHFAVNHFTLGNVYVAMEEFEKALVWYESTLKLQPEFVPAKNRIQTIQCHLMLKKGRRSP 1141

HSP 3 Score: 83.1889 bits (204), Expect = 4.477e-17
Identity = 70/256 (27.34%), Postives = 119/256 (46.48%), Query Frame = 0

Query:   95 DRERLAFFSDPDCRITQKKLSDFDLYLSSFLRLEAKKIKIEDFA--DYKVQLPEDKEKFTKPYCNSEFAFSMHSYDHLKGVGDRKLLINASEAGLVNPIPHAKKL------------EEFGHRINVALEK-NETSWVLLNFASIYWRVAGNAYYAVECLRRALHYSPRKHKDLALVSLANILHRSKYSLDAAILMHAALEMTTDYDIVYFTLGNIYGALGQFDLADICYKYVSDLQPAF-EAARLRMHAARCEFKL 334
            D++ + +    DC  +  ++       + FL  E K ++I + +  DY  +     E+   P C+       H+  +L    + ++ + A       P  HA+K+            EE G  +  A+ K N   W++LN A +YWR  GN+ +A+ CL+RAL+ +P +++D+ LV+LAN+L      LDA  L+  AL + +   + + +LGN Y AL          K +S    AF +A +L      CE  L
Sbjct:  494 DKQHILWPKRADCTESYPRVPVGGELPTYFLPPENKGLRIHELSSDDYSTE-----EEAQTPDCSITDFRKSHTLSYLVKELEVRMDLKAKM-----PDDHARKILLSRINNYTIPEEEIGSFLFHAINKPNAPIWLILNEAGLYWRAVGNSTFAIACLQRALNLAPLQYQDVPLVNLANLLIHYGLHLDATKLLLQALAINSSEPLTFLSLGNAYLAL----------KNISGALEAFRQALKLTTKCPECENSL 729

The following BLAST results are available for this feature:

BLAST of TCONS_00063777-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00063777-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TTC17	3.125e-57	37.64	Tetratricopeptide repeat protein 17 OS=Homo sapien...	[more]

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TCONS_00063777-protein (polypeptide) - C. hemisphaerica