TCONS_00064113-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00064113-protein
Unique Name	TCONS_00064113-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	439

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00064113-protein ID=TCONS_00064113-protein|Name=TCONS_00064113-protein|organism=Clytia hemisphaerica|type=polypeptide|length=439bp
MAENKYEMLVRPRRLDSNFKIQQQPWYKERLTGKYEKKPTLLTSSWTFVK
DGMDDFRNGIIPKLDSSIVLKGSKGIQPSIFGSSSSVNKFQNQELLKHLS
KKEAAYTRTLPSQQRKQKKVNEVEQKLLAHPLALYPHIEDSVPPDLFEEI
VDLLDPSMTLANDMSDQGSESSVDGLSNLNSNEQNLKEININAKAQATPS
SVDNSYSNAFRRLPNKKTLNNEEDERNSRKKGKQTQLTKIETVTKEFCGW
IRDLGGDTNNIEEATIKNLFATGYESKPALSVPVHVVELTSVPAELRLED
KEDRKEENILPAIKKKADYTPSWVKVKYGAWYLDPKTWKAREADKPLRDP
REINEKQMTDAKKKTKTLDKTLTMLHGAQAFKEFVESKGTRKPEFLENVV
TTIDRDSMEPSTMATSKATNNQNRVKRPENKAFASILKS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040197	XLOC_040197	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00064113	TCONS_00064113	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032743	FAM47

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 176..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..439
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..236
IPR032743	FAM47 family	PFAM	PF14642	FAM47	coord: 22..172 e-value: 1.1E-13 score: 51.2

Blast

[Close]

BLAST of TCONS_00064113-protein vs. Swiss-Prot (Human)
Match: FA47E (Protein FAM47E OS=Homo sapiens GN=FAM47E PE=2 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 6.640e-36
Identity = 109/380 (28.68%), Postives = 177/380 (46.58%), Query Frame = 0

Query:   37 KKPTLLTS-SWTFVKDGMDDFRNGIIPKLDSSIVLKGSKGIQPSIFGSSSSVNKFQNQELLKHLSKKEAAYTRTLPSQQRKQKKVNEVEQKLLAHPLALYPHIEDSVPPDLFEEIVDLLDPSMTLANDMSDQGSESSVDGLSNLNSNEQNLKEININAKAQAT-----PS---SVDNSYSNAFRRLPNKKTLNNEEDERNSRKKGKQTQLTKIETVTKEFCGWIRDLGGDTNNIEEATIKNLFATGYESKPALSVPVHVVELTSVPAEL-------RLEDKEDRKEENILPAIKKKAD-YTPSWVKVKYGAWYLDPKTWKAREADKPLRDPREINEKQMTDAKKKTKTLDKTLTMLHGAQAFKEFVESKGTRKPEFLENV 399
            K PT L S    F + G+DDFR G  P     +     +G  P I+  +  +   + Q     L K+    ++  P+QQ ++  + +VE  L  HPLALY ++E+++P +L  +++++LDP   L             D  +      + +KE     K  +T     PS   SV N+    +   P+K  L +E   R    +                           ++I+E  I   F   YE+KP+    +H ++L  VP EL       +L++ E  ++      ++K  + Y P WVK++YGAWYL+PK WK +  D+PL DP   ++ Q  + KK+ +  ++ L  LHG  AFK+F+ S+G R P FLEN+
Sbjct:   35 KFPTSLHSRQLVFPRKGLDDFRKGC-PPCTGLVTQVPVEGFLPQIYHRAPQLAPKKRQ---IKLLKEADVLSKLSPAQQARKAFLEDVEAHLTPHPLALYLNLEEAMPIELLSKVLEVLDPDRKLE------------DTWAYCQDTRKGMKEPTKLLKKHSTQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGPRPGLHE------------------------NGISDIDEEFILKQFDIDYETKPSHDA-LHTMKLNQVPLELKRSVGLSKLQETEFFQKLGYERKLQKPQNPYKPKWVKMRYGAWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQEELLADLHGTVAFKDFILSRGYRTPRFLENM 373

The following BLAST results are available for this feature:

BLAST of TCONS_00064113-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00064113-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FA47E	6.640e-36	28.68	Protein FAM47E OS=Homo sapiens GN=FAM47E PE=2 SV=3	[more]

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TCONS_00064113-protein (polypeptide) - C. hemisphaerica