TCONS_00064978-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064978-protein
Unique NameTCONS_00064978-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length108

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064978-protein ID=TCONS_00064978-protein|Name=TCONS_00064978-protein|organism=Clytia hemisphaerica|type=polypeptide|length=108bp
KGWTPLHYAAYEGFFKTVNRLVENKPSRLEVKTQDEMKVTPLWLAFAEGH
IETVGVLLMYNADITVVDVDENDIIDIAFINHQNKLLLYIINNNYEHLYE
MVWQRLFE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040740XLOC_040740Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064978TCONS_00064978Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 1..31
e-value: 0.039
score: 23.1
coord: 37..66
e-value: 0.11
score: 21.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 37..69
score: 9.03
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..24
score: 8.843
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 2..68
e-value: 1.3E-9
score: 38.5
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 1..105
e-value: 1.3E-18
score: 66.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..94
score: 15.035
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 2..96
NoneNo IPR availableCDDcd00204ANKcoord: 2..91
e-value: 6.51309E-13
score: 59.3194

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064978-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top