TCONS_00065800-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065800-protein
Unique NameTCONS_00065800-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length285

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065800-protein ID=TCONS_00065800-protein|Name=TCONS_00065800-protein|organism=Clytia hemisphaerica|type=polypeptide|length=285bp
MAFHRAITNDVDIFCKYKERGCLWTGSINDFEKHEKLNCQFTTIKCSFQQ
CNMTFWRKFQPNHEKICQYRLAHCDYCKNKDLRFVDLEAHHVVCDQFPSG
CGNIGCHVILPREKMINSHSKECPFEVVPCKFHEIGCKITILRSKQKEHD
ETFQSQHMDLLLHNTVQLKKELQSSQQELEKQKALNEKQKGLNEKIIHAL
QATNGFIDLTVARLFELLRKPRSPYGLFEDAIQYDSYRLSTKEQRFLSLS
HEDRIKTLLSRMEIGEIYRINENVAIFKIQVSKAR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041227XLOC_041227Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065800TCONS_00065800Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001293Znf_TRAF
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..192
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 105..149
e-value: 4.3E-10
score: 39.2
coord: 79..104
e-value: 0.025
score: 14.2
coord: 5..55
e-value: 3.8E-12
score: 45.7
coord: 56..78
e-value: 0.13
score: 12.0
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 90..149
e-value: 1.5E-8
score: 35.1
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 34..80
score: 8.845
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 89..138
score: 11.064
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 11..81
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 101..152

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065800-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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