TCONS_00065960-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065960-protein
Unique NameTCONS_00065960-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length635

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065960-protein ID=TCONS_00065960-protein|Name=TCONS_00065960-protein|organism=Clytia hemisphaerica|type=polypeptide|length=635bp
MVALKIAKPSVVFFFLLYAVLEVDCTLPKVTRVKSGNVGSLAGGTMLILE
GVGFSEDMYTTGKGNEVYFEHKISKEVLTCKLVMTDSNEKRIACETPPEP
SSRDGDYHIKVKVDGESIYCTQTFHYRNNQTPFIRKITSQSGFPGETMRI
EGRFLSKQISRIDGGKEGDGETFVADAREINKFFVGTSIGNAFDETNEII
GMQFDSNNYHTEGWVKIQAELKIPGSFNVSFITSLNAGRSRRLQSSLFVD
ATDEIYNYQTYALVHSIKPNKGSMEGGTTLEIHGEFFGTPSITKNVWIKV
AGIKCEVIQHTREMIKCITGKADQNLLNGDLFAGGRGYFQEAWPNHRNYD
VKTVRTRYNSTYPIKSLKTTEYALQDYNNYDKYEVKLSYASARYEGFLRP
PYSGMFRLMINCDDQGEFFISQGSQNRSRDNMTLVAFSYSHTNRNFWYRA
SQQSEPMYLDRNKEYFYQAYVADGGGSLYFQLGLFGEKTQHPNSRVNKAR
DEKQQIFIKSYHRPNVQILNMTNASLHTKFNISMDGKKSSQEISRNSTTK
EIEKVFYDLFSTSCEYQPIPESAIFYHESYETSKHKDHTEYGWRTTNKRA
ACGRYSLKMHDNNNIAFLATRTARPDTGRINNWYL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041320XLOC_041320Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065960TCONS_00065960Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002909IPT
IPR013783Ig-like_fold
IPR014756Ig_E-set
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002909IPT domainSMARTSM00429iptmega2coord: 263..352
e-value: 3.8
score: 9.1
coord: 27..127
e-value: 8.9E-7
score: 38.5
IPR002909IPT domainPFAMPF01833TIGcoord: 37..126
e-value: 2.4E-5
score: 24.2
coord: 264..329
e-value: 1.3E-6
score: 28.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 22..124
e-value: 6.8E-10
score: 38.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 249..366
e-value: 1.4E-10
score: 40.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 125..246
e-value: 0.035
score: 13.4
NoneNo IPR availableGENE3D2.60.120.380coord: 368..486
e-value: 1.5E-8
score: 34.2
NoneNo IPR availableCDDcd00603IPT_PCSRcoord: 264..322
e-value: 7.06277E-12
score: 61.3165
NoneNo IPR availableCDDcd00102IPTcoord: 28..127
e-value: 3.04818E-8
score: 50.5376
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 35..126
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 263..326

Blast
[Close]
BLAST of TCONS_00065960-protein vs. Swiss-Prot (Human)
Match: PKHL1 (Fibrocystin-L OS=Homo sapiens GN=PKHD1L1 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 2.795e-37
Identity = 149/557 (26.75%), Postives = 246/557 (44.17%), Query Frame = 0 
Query:   27 LPKVTRVKSGNVGSLAGGTMLILEGVGFSE-DMYTTGK-----GNEVYFEHKISKEVLTCKLVMTDSNEKRIACETPPEPSSRDGDYHIKVKVDG----ESIYCTQ-------TFHYRNNQTPFIRKITSQSGFPGETMRIEGRFLS----KQISRIDGGKEGDGETFVADAREINKFFVGTSIGNAFDETNEIIGMQFDSNNYHTEGWVKIQAELKIPGSFNVSFITSLNAGRSRRLQSSLFVDATDEIYNYQTYALVHSIKPNKGSMEGGTTLEIHGEFFGTPSITKNVWIKVAGIKCEVIQHTREMIKCITGKADQNLLNGDLFAGGRGYFQEAWPNHRNYDVKTVRTRYNSTYPIKSLKTTEYALQDYNNYDKYEVKLSYAS--ARYEGFLRPPYSGMFRLMINCDDQGEFFISQGSQNRSRDNMTLVAFSYSHTNRNFWYRA-SQQSEPMYLDRNKEYFYQAYVADGGGSLYFQLGLFGEKTQHPNSRVNKARDEKQQIFIKSYHRPNVQILNMTNASLHTKFNISMDGKKSSQEISRNSTTKEIEKVFYDL 559
            +PKVT +     GS+ G T L + G GFS+ + +  G      GN V      S + +TC +    S+  +I C T   P   +  Y ++V VDG    E+  C         TF+ ++ +TP IR IT  SG PG  + I+GR  +      I+    GK         + R +  +  G        +++ + G++ D  N    G +  +      G  NVSFI   + GRS   + + FV + ++I  +QTYA V  I P++GS+ GGTTL I G FF        V + V G  C+++  T   I C T      L    ++ GGRG   E W N R   ++ +   YN        KT  Y    + +   Y   +   +  AR+ GFL  P S ++R  I  DD+   + SQ      +     V  +Y   N N ++ + +Q+S+ ++L + KEY+ +  + +   S +  +GL+  +  +   +   A +E+Q I  +S     VQ++ + N       N     K +S  +  NS +    ++ Y++
Sbjct:   30 IPKVTEIIP-KYGSINGATRLTIRGEGFSQANQFNYGVDNAELGNSVQLIS--SFQSITCDVEKDASHSTQITCYTRAMP---EDSYTVRVSVDGVPVTENNTCKGHINSWECTFNAKSFRTPTIRSITPLSGTPGTLITIQGRIFTDVYGSNIALSSNGK---------NVRILRVYIGGMPCELLIPQSDNLYGLKLDHPNGDM-GSMVCKTTGTFIGHHNVSFILDNDYGRSFPQKMAYFVSSLNKIAMFQTYAEVTMIFPSQGSIRGGTTLTISGRFFDQTDFP--VRVLVGGEPCDILNVTENSICCKTPPKPHIL--KTVYPGGRGLKLEVWNNSRPIRLEEI-LEYNE-------KTPGYMGASWVDSASYIWLMEQDTFVARFSGFLVAPDSDVYRFYIKGDDRYAIYFSQTGLPEDK-----VRIAYHSANANSYFSSPTQRSDDIHLQKGKEYYIEILLQEYRLSAFVDVGLYQYRNVYTEQQTGDAVNEEQVIKSQSTILQEVQVITLENWETTNAINEVQKIKVTSPCVEANSCSLYQYRLIYNM 553
The following BLAST results are available for this feature:
BLAST of TCONS_00065960-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKHL12.795e-3726.75Fibrocystin-L OS=Homo sapiens GN=PKHD1L1 PE=2 SV=2[more]
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