TCONS_00065970-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065970-protein
Unique NameTCONS_00065970-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length415

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065970-protein ID=TCONS_00065970-protein|Name=TCONS_00065970-protein|organism=Clytia hemisphaerica|type=polypeptide|length=415bp
MEKLVLDIESISRLATRQTSVKEFATVLEQLDVYSGKIREKLKEPNLPQL
HRDSLREIQKCISQIIKENQQTSKQEDNLPQSQEKEEQRERAIGQTIIKA
GEVRFQDIAGLDVVKSLLHEAVILPVQYPHLFTGKVKPWKSILLYGPPGT
GKSTIAHAVSTEANCTFYSLSSSDLLSSWFGESEKLIKELFSQARSNPRA
IIFIDEIDSICRKRSSKEEETTRRIKNELLKQMDGFSRTSTSASPSDEPK
KHLFVLCATNCPWELDTAFLRRFSKRIYIPLPDANSRKQLFRIHLKDVEM
SIDDSDYDQLVDKTDGYSGSDISNCISEAVMEPIRELRDCSTWKWNDSKM
SLSPTIKSDASAISLRLENIPREKVQPRKLNTKDLFHSISLNKKTVSQEE
TVRFQQFTEDFGQNG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041323XLOC_041323Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065970TCONS_00065970Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR015415Vps4_C
IPR003959ATPase_AAA_core
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 138..283
e-value: 8.8E-20
score: 81.7
IPR015415Vps4 oligomerisation, C-terminalPFAMPF09336Vps4_Ccoord: 354..412
e-value: 1.9E-10
score: 40.5
NoneNo IPR availableGENE3D1.10.8.60coord: 297..414
e-value: 2.3E-18
score: 65.6
NoneNo IPR availableGENE3D3.40.50.300coord: 77..296
e-value: 1.8E-51
score: 174.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..90
NoneNo IPR availableCDDcd00009AAAcoord: 137..281
e-value: 3.62247E-19
score: 82.1939
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 142..281
e-value: 1.5E-40
score: 138.6
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 253..272
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 103..348

Blast
[Close]
BLAST of TCONS_00065970-protein vs. Swiss-Prot (Human)
Match: VPS4A (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 7.648e-102
Identity = 165/414 (39.86%), Postives = 251/414 (60.63%), Query Frame = 0 
Query:   18 QTSVKEFATVLEQLDVYSGKIREKLKEPNLPQLHR-----DSLREIQKCISQIIKENQQTSKQEDNLPQSQ--EKEEQRERAIGQTIIKAGEVRFQDIAGLDVVKSLLHEAVILPVQYPHLFTGKVKPWKSILLYGPPGTGKSTIAHAVSTEA-NCTFYSLSSSDLLSSWFGESEKLIKELFSQARSNPRAIIFIDEIDSICRKRSSKEEETTRRIKNELLKQMDGFSRTSTSASPSDEPKKHLFVLCATNCPWELDTAFLRRFSKRIYIPLPDANSRKQLFRIHLKDVEMSIDDSDYDQLVDKTDGYSGSDISNCISEAVMEPIRELRD-------CSTWKWNDSKMS---LSPTIKSDASAISLRLENIPREKVQPRKLNTKDLFHSISLNKKTVSQEETVRFQQFTEDFGQ 413
            Q +V+ F   + + + +S K +E ++   +  L R     D LR  +K   + +KENQ   K  D+  +    EK++ +E+ +G  +++   +R+ D+AGL+  K  L EAVILP+++PHLFTGK  PW+ ILL+GPPGTGKS +A AV+TEA N TF+S+SSSDL+S W GESEKL+K LF  AR +  +IIFIDE+DS+C  R+  E E  RRIK E L QM G    +              VL ATN PW LD+A  RRF KRIYIPLP+  +R Q+FR+HL     ++ D++  +L  KT+GYSG+DIS  + +++M+P+R+++        C   + N S M    L+P    D  A+ +   ++P +K+    +   D+  S++  + TV+ ++ ++ ++F+EDFGQ
Sbjct:   33 QHAVEYFLHAI-KYEAHSDKAKESIRAKCVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGT----------LVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCGPSRTNPSMMIDDLLTPCSPGDPGAMEMTWMDVPGDKLLEPVVCMSDMLRSLATTRPTVNADDLLKVKKFSEDFGQ 435
The following BLAST results are available for this feature:
BLAST of TCONS_00065970-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VPS4A7.648e-10239.86Vacuolar protein sorting-associated protein 4A OS=... [more]
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