TCONS_00066167-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066167-protein
Unique NameTCONS_00066167-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length806

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066167-protein ID=TCONS_00066167-protein|Name=TCONS_00066167-protein|organism=Clytia hemisphaerica|type=polypeptide|length=806bp
MRRTHNTRRQDIKVSNKEAREFASSFVSGIQNSILLENQNSDSAAKLNNK
KWPIQYELSARYWQRSNSFQAGCFEGVESSCPEDSHFENSFGTSNSFEDY
QSFGRQEISLSEGSMMQGNYLNSYYQKNDSPTHLSSSYENPVVTSNVDSL
KYGKKCPVCNEINEKNSNWCMECGKAIISVEIRRYNEEGEPFSLPKQGNS
LQQAWNYSYSPPRHIQQQASIEKDPLPNNLSMLMEDMRISNPYPSNVNLS
PNDPSITSSVSFDFENPQFDDIHYENFKYSKHHAVYRRASTGGNEKRKEK
EDFYPFDDLLYPEFAIYDPNLGYAFPSSNIVSNGFYFQQQSAYPFNSNQQ
FGVNETPLQQKSQFAAENRKKKNLQKKRKKKKFNKSPVYNQRFPGYSPQD
FVKFNEVPNGTEENECHWGTLPDEIILHIFGYLKMKDIISCLQVCRNFYK
IANDSVLWKEISFRKHLNLTDNVLQKIAWKHPTSLSLVQCNGKQITSEGL
RYLFKTCAESLEKLDVSCCHGGVFVGESILLYAAVKCQNIKSLDVSWSNV
SNNSIQSISKASTRLEKLCLNGCQAITDDSIIKIVKKHGESLEVLEVLGC
FNISFLSTNAVSEYCKRLIKLNVGQCHKITNGALSTISKSLPKLQVLDIR
GCKQIRDISLKNIAVGCQQLKTIVIANCPLITDASLAAIAVHLPKLECID
VCGCGKISDRGVLSLVKGCRQMKSLDLSSTKVTHKSVTGVGNYNRYTIQS
LKLSFCHSITDQCLRTVVERSKRLQTLHLYGCKPLRHLAKLLEINPSLKI
ERESLR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041415XLOC_041415Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066167TCONS_00066167Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR001810F-box_dom
IPR032675L_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 562..587
e-value: 0.21
score: 20.7
coord: 615..640
e-value: 0.54
score: 19.3
coord: 771..791
e-value: 360.0
score: 2.4
coord: 693..718
e-value: 0.0041
score: 26.4
coord: 641..666
e-value: 0.51
score: 19.4
coord: 748..770
e-value: 160.0
score: 5.2
coord: 719..743
e-value: 250.0
score: 3.6
coord: 667..692
e-value: 6.8E-4
score: 28.9
coord: 537..561
e-value: 9.9
score: 14.6
coord: 483..506
e-value: 650.0
score: 0.4
IPR001810F-box domainSMARTSM00256fbox_2coord: 421..461
e-value: 4.9E-10
score: 49.4
IPR001810F-box domainPFAMPF12937F-box-likecoord: 419..464
e-value: 1.5E-14
score: 53.5
IPR001810F-box domainPROSITEPS50181FBOXcoord: 415..461
score: 13.551
IPR001810F-box domainSUPERFAMILY81383F-box domaincoord: 415..489
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 676..800
e-value: 6.8E-18
score: 64.0
coord: 410..675
e-value: 1.4E-41
score: 141.7
NoneNo IPR availableGENE3D2.20.28.20coord: 153..184
e-value: 8.1E-4
score: 18.3
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 708..798
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 480..715

Blast
[Close]
BLAST of TCONS_00066167-protein vs. Swiss-Prot (Human)
Match: FBXL7 (F-box/LRR-repeat protein 7 OS=Homo sapiens GN=FBXL7 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.419e-31
Identity = 99/373 (26.54%), Postives = 172/373 (46.11%), Query Frame = 0 
Query:  421 LPDEIILHIFGYLKMKDIISCLQVCRNFYKIANDSVLWKEISFRKHLNLTDNVL----QKIAWKHPT---SLSLVQCNG-KQITSEGLRYLFKTCAESLEKLDVSCCHGGVFVGESILLYAAVKCQNIKSLDVSWSNVSNNSIQSISKASTRLEKLCLNGCQAITDDSIIKIVKKHGE--SLEVLEVLGCFNISFLSTNAVSEYCKRLIKLNVGQCHKITNGALSTISKSLPKLQVLDIRGCKQIRDISLKNIAVGCQQLKTIVIANCPLITDASLAAIAVHLPKLECIDVCGCGKISDRGVLSLVKGCRQMKSLDLSSTKVTHKSVTGVGNYNRYTIQSLKLSFCHSITDQCLRTVVERSKRLQTLHLYGCK 783
            LPD  ++ IF +L    +  C +VCR +Y +A D  LW+ I         D  L    +++    P     L  V  +G +++T  GL Y    C   L +L+VS C+    +    +      C N++ LDVS            SK +          C ++T ++ IK+   HG+  S+  L++  CF +     + ++ +C +L  L + +C ++T+  L  +      ++ L +  C+ + D  L+ IA    +L+ + IA+C  +TD  +  +A +  KL  ++  GC  I+D GV  L K C ++KSLD+    +   +       N + ++ L L  C SIT Q L+ V      LQTL++  C+
Sbjct:  117 LPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLWRTIRLTGETINVDRALKVLTRRLCQDTPNVCLMLETVTVSGCRRLTDRGL-YTIAQCCPELRRLEVSGCYN---ISNEAVFDVVSLCPNLEHLDVS----------GCSKVT----------CISLTREASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCASIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRVTDVGIRYVAKYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLECLALNCFNLKRLSLKSCESITGQGLQIVAANCFDLQTLNVQDCE 465
The following BLAST results are available for this feature:
BLAST of TCONS_00066167-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBXL74.419e-3126.54F-box/LRR-repeat protein 7 OS=Homo sapiens GN=FBXL... [more]
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