TCONS_00067255-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067255-protein
Unique NameTCONS_00067255-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length212

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067255-protein ID=TCONS_00067255-protein|Name=TCONS_00067255-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
MAEEGINFDKLQKEFYNAKKADQKYSRENDAKFRAVHQKVASYEEFRDIV
TASHLQPLDRDDITGVKNVQQPWNTAYNTDQKDLKHNNIATSTLTEQTNG
IKTRDDFLKTWSTVENKVEYILSFDMDFLRSVFKCDIPFNFLETYVKSIK
NDLSIDSLPKIINIFKVFTLCERFSLTLKFLGKKDKEELKSLLETIEKNG
HNIDEVKNLYGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042014XLOC_042014Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067255TCONS_00067255Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031733Dynein_attach_N
IPR025986RPAP3-like_C
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031733Dynein attachment factor, N-terminalPFAMPF15867Dynein_attach_Ncoord: 6..74
e-value: 1.9E-27
score: 94.9
IPR025986RNA-polymerase II-associated protein 3-like, C-terminal domainPFAMPF13877RPAP3_Ccoord: 102..186
e-value: 1.1E-6
score: 28.9

Blast
[Close]
BLAST of TCONS_00067255-protein vs. Swiss-Prot (Human)
Match: CC103 (Coiled-coil domain-containing protein 103 OS=Homo sapiens GN=CCDC103 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.889e-30
Identity = 68/201 (33.83%), Postives = 101/201 (50.25%), Query Frame = 0 
Query:    6 INFDKLQKEFYNAKKADQKYSRENDAKFRAVHQKVASYEEFRDIVTASHLQPLDRDDITGVKNVQQPWNTAYNTDQKDLKHNNIATSTLTEQTN-GIKTRDDFLKTW----STVENKVEYILSFDMDFLRSVFKCDIPFNFLETYVKSIKNDLSIDSLPKIINIFKVFTLCERFSLTLKFLGKKDKEELKSLLETIEKNGH 201
            INF  L+KE   A  AD+KY REN AK RAV Q+VASYEEFR IV ASHL+PL+R D  G K    PWN   +T Q      ++AT    E+     +T  DF + W     +   + + +L      L  +F+ D+ F  L   + ++ + +       ++ I        RF+L L  L + ++E  K L + ++  G+
Sbjct:    7 INFKALEKELQAALTADEKYKRENAAKLRAVEQRVASYEEFRGIVLASHLKPLERKDKMGGKRT-VPWNC--HTIQGR-TFQDVATEISPEKAPLQPETSADFYRDWRRHLPSGPERYQALLQLGGPRLGCLFQTDVGFGLLGELLVALADHVGPADRAAVLGILCSLASTGRFTLNLSLLSRAERESCKGLFQKLQAMGN 203
The following BLAST results are available for this feature:
BLAST of TCONS_00067255-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC1032.889e-3033.83Coiled-coil domain-containing protein 103 OS=Homo ... [more]
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