TCONS_00067439-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067439-protein
Unique NameTCONS_00067439-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length294

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067439-protein ID=TCONS_00067439-protein|Name=TCONS_00067439-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MELIKLFVTTLFLSVIPYIACSYVDLNLFCGDYNNGLIDVACLERIGDTQ
HMKTLIYNGRNDIDWNNYGASVEKILCKCKKLAQDSEKQYLSFGIQFYGE
CWASEYSVEDLLKKVPTSNKCVNGTYKECQPQNFHRKVEGLNGGEITIQS
QACAGTDVSTSLYTYYYLREVEIETPDIGKETEWTSWTTCTKSCGKGYQE
RTRTACEMVSGVRRCDVLKEEMRECNKHACEEEKEEFRPINGKFREWSNW
SPCVCGNTAPSIRTRKCDNPKPQNSGRNCVGEPFQMRPCFKMNC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042126XLOC_042126Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067439TCONS_00067439Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 181..231
e-value: 3.3E-9
score: 46.6
coord: 244..293
e-value: 0.077
score: 19.2
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 240..294
e-value: 3.9E-10
score: 39.4
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 246..293
e-value: 3.0E-4
score: 20.8
coord: 183..230
e-value: 6.6E-6
score: 26.1
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 177..230
e-value: 4.1E-9
score: 36.2
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 177..231
score: 10.63
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 241..293
score: 9.208
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 241..289
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 182..230

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067439-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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