TCONS_00067506-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067506-protein
Unique Name	TCONS_00067506-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	457

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067506-protein ID=TCONS_00067506-protein|Name=TCONS_00067506-protein|organism=Clytia hemisphaerica|type=polypeptide|length=457bp
DVRKSKAVCQTDFYLIRMLPRKRTFVISRKEGRRIKNSLANGKDVIDLGA
KYDYVRGIEGVNYTKKEEYDIVTLKDLKQKTPFVPVKTTVINGHRFEHHN
KPTWCDMCEDFIWGLYTQAVRCQYCRYTCHAKCVTLVDLECPKKPTTEKS
REELTKETLEILNDVTDGAATLKRKNNNLPNYVSSISQLSKLIKEYNKES
SLIMTLHEDYTFDGFIRVHMNLSRPVNVSSDVSNLTLKKAVAKNKSMNRK
SISDVFNIDTNIKRRTSTSDDSGIGSQSSTASSTIFANDPATLIPTGSRK
GRRPSRRLSFYMPKGTYKPLHVTSKTTAREVIEALLAKYNVTDNPKKFAL
YEKRTNEAPGSREKEVMYRRIPDEENPLVLCLSWGASKDGSPTFALKENE
DGKVQWEYFELPELNNFLKILQLEEDELIAGVMQKYENYREELCKALESK
SPESTGT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042152	XLOC_042152	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067506	TCONS_00067506	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000159	RA_dom
IPR002219	PE/DAG-bd
IPR011524	SARAH_dom
IPR029071	Ubiquitin-rel_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0007165	signal transduction
GO:0035556	intracellular signal transduction

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0007165	signal transduction

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000159	Ras-associating (RA) domain	SMART	SM00314	RA_5	coord: 304..401 e-value: 3.0E-15 score: 66.7
IPR000159	Ras-associating (RA) domain	PFAM	PF00788	RA	coord: 307..401 e-value: 1.3E-17 score: 64.1
IPR000159	Ras-associating (RA) domain	PROSITE	PS50200	RA	coord: 304..401 score: 25.093
IPR002219	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	SMART	SM00109	c1_12	coord: 94..141 e-value: 1.4E-13 score: 61.1
IPR002219	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	PFAM	PF00130	C1_1	coord: 94..143 e-value: 4.2E-13 score: 48.9
IPR002219	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	PROSITE	PS00479	ZF_DAG_PE_1	coord: 94..141
IPR002219	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	PROSITE	PS50081	ZF_DAG_PE_2	coord: 93..141 score: 14.208
IPR002219	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	CDD	cd00029	C1	coord: 94..141 e-value: 4.92804E-16 score: 71.3691
IPR011524	SARAH domain	PFAM	PF16517	Nore1-SARAH	coord: 409..447 e-value: 2.9E-11 score: 43.1
IPR011524	SARAH domain	PROSITE	PS50951	SARAH	coord: 403..450 score: 14.013
None	No IPR available	GENE3D	3.10.20.90		coord: 257..402 e-value: 5.0E-21 score: 74.9
None	No IPR available	GENE3D	3.30.60.20		coord: 87..157 e-value: 1.8E-19 score: 68.8
None	No IPR available	SUPERFAMILY	57889	Cysteine-rich domain	coord: 83..143
IPR029071	Ubiquitin-related domain	SUPERFAMILY	54236	Ubiquitin-like	coord: 311..400

Blast

[Close]

BLAST of TCONS_00067506-protein vs. Swiss-Prot (Human)
Match: RASF1 (Ras association domain-containing protein 1 OS=Homo sapiens GN=RASSF1 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.802e-52
Identity = 124/367 (33.79%), Postives = 182/367 (49.59%), Query Frame = 0

Query:   93 GHRFEHHNKPT--WCDMCEDFIWGLYTQAVRCQY----CRYTCHAKCVTLVDLEC--PKKPTTEKSREELTKETLEILNDVTDGAATLKRKNNNLPNYVSSISQLSKLIKEYNKE--SSLIMTLHEDYTFDGFIRVHMNLSRPVNVSSDVSNLTLKKAVAKNKSMNRKSISDVFNIDTNIKRRTSTSDDSGIGSQSSTASSTIFANDPATLIPTGSRKGRRPSRRLSFYMPKGTYKPLHVTSKTTAREVIEALLAKYNVTDNPKKFALYEKRTNEAPGSREKEVMYRRIPDEENPLVLCLSWGASKDGSPTFALKENEDGKVQWEYFELPELNNFLKILQLEEDELIAGVMQKYENYREELCKALES 449
            GHRF+     T  WCD+C DFIWG+  + ++C      C++TCH +C  LV L+C  P+    E + E  T     +  +  D                 S +++ + IKEYN +  S+L M+L++D ++ GFI+V                L L + V+   S    S+ D         RR                               G  +G    RR SFY+PK   K LHV S+T AREVIEALL K+ V D+P+KFAL+E+        R  +V  R++ D+E PL L L  G S D + +F LKEN+ G+V W+ F +PEL+NFL+ILQ EE+E +  ++QKY   R+++ +AL +
Sbjct:   51 GHRFQPAGPATHTWCDLCGDFIWGVVRKGLQCARLSADCKFTCHYRCRALVCLDCCGPRDLGWEPAVERDTNVDEPVEWETPD----------------LSQAEIEQKIKEYNAQINSNLFMSLNKDGSYTGFIKVQ---------------LKLVRPVSVPSSKKPPSLQDA--------RR-------------------------------GPGRGTSVRRRTSFYLPKDAVKHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFER------AERHGQVYLRKLLDDEQPLRLRLLAGPS-DKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQEALHA 340

The following BLAST results are available for this feature:

BLAST of TCONS_00067506-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067506-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RASF1	1.802e-52	33.79	Ras association domain-containing protein 1 OS=Hom...	[more]

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TCONS_00067506-protein (polypeptide) - C. hemisphaerica