TCONS_00067584-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067584-protein
Unique NameTCONS_00067584-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length633

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067584-protein ID=TCONS_00067584-protein|Name=TCONS_00067584-protein|organism=Clytia hemisphaerica|type=polypeptide|length=633bp
MEETSETNDNNENKKSENKDSEYEENEIAEHVEISDDVKDVDDEYEVAED
EQIVKELIEDGLSQVGHSASGTNQVYLNLTLQNKDICDISFLVDYNQIQV
LDLSHNRLEDLSMLKCLPFLISLNVSNNQLTKIIDFIPPLRIREMNFSNN
KISTIADLSMHASLHTLLLDFNEIEEISGLENCASLKNLSISNNRISKIT
GLSNLNLKQLDLSYNDIRRIENLQDLEFIQYLNLSFNNIRSLRGLQEHGY
LEEINLHKNQILDLSEIRYLRDLRMLRILNLSENPIKEIESYRISAVFKL
SKLVELDEMQVTPEEKVHACNFFQPSKELSATKDHMYNLMKFYQQPQRLM
DSSLPILEPYPMLIITGPLGLSKKELVKQLSTEFSNFFSKVKGHTTAAVN
TEEFYHVTEDEFETMRFKGEFLQTCTVCGVYHGISRSEIENVAKTGLAAV
LTTTIDGVMGFKCTHYEPRVILVLPKDIEDFKQELYDSNRYNETEIDAAL
KNVNFCTNLHMERPGYFDTVITTDSYEERYGNLKETVLDFLGLNSSSSRK
SCSFSRTPSLTKSIRSRLNNDNGGTDVFASSPVNISRAGNRSSLWSSHEH
FIPSNTPNTPAVFAYSRRFEATRSVLSRAFMFQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042202XLOC_042202Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067584TCONS_00067584Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008145GK/Ca_channel_bsu
IPR025875Leu-rich_rpt_4
IPR032675L_dom-like
IPR001611Leu-rich_rpt
IPR008144Guanylate_kin-like_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 226..245
e-value: 210.0
score: 3.6
coord: 117..136
e-value: 2.5
score: 17.1
coord: 183..202
e-value: 180.0
score: 4.1
coord: 139..158
e-value: 100.0
score: 5.9
coord: 95..114
e-value: 130.0
score: 5.3
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 183..204
e-value: 1.0
score: 18.4
coord: 95..116
e-value: 540.0
score: 1.4
coord: 205..225
e-value: 2.4
score: 17.2
coord: 161..182
e-value: 110.0
score: 6.9
coord: 226..247
e-value: 110.0
score: 7.1
NoneNo IPR availablePFAMPF14580LRR_9coord: 209..331
e-value: 5.9E-13
score: 48.6
NoneNo IPR availableGENE3D3.40.50.300coord: 339..555
e-value: 2.7E-30
score: 104.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
IPR008145Guanylate kinase/L-type calcium channel beta subunitSMARTSM00072gk_7coord: 360..541
e-value: 5.4E-6
score: 30.9
IPR008145Guanylate kinase/L-type calcium channel beta subunitPFAMPF00625Guanylate_kincoord: 363..537
e-value: 6.3E-17
score: 61.7
IPR025875Leucine rich repeat 4PFAMPF12799LRR_4coord: 98..133
e-value: 3.5E-6
score: 27.1
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 4..148
e-value: 3.6E-10
score: 39.0
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 193..325
e-value: 5.2E-21
score: 74.0
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 149..192
e-value: 8.7E-9
score: 34.3
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 77..307
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 275..296
score: 7.504
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 206..227
score: 9.937
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 228..249
score: 7.566
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 250..271
score: 7.358
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 163..184
score: 8.143
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 185..205
score: 9.237
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 97..118
score: 8.675
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 119..140
score: 6.518
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 141..162
score: 6.603
IPR008144Guanylate kinase-like domainPROSITEPS50052GUANYLATE_KINASE_2coord: 360..538
score: 16.693
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 360..538

Blast
[Close]
BLAST of TCONS_00067584-protein vs. Swiss-Prot (Human)
Match: LRGUK (Leucine-rich repeat and guanylate kinase domain-containing protein OS=Homo sapiens GN=LRGUK PE=2 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 8.510e-126
Identity = 207/506 (40.91%), Postives = 314/506 (62.06%), Query Frame = 0 
Query:   50 DEQIVKELIEDGLSQVGHSASGTNQVYLNLTLQNKDICDISFLVDYNQIQVLDLSHNRLEDLSMLKCLPFLISLNVSNNQLTKIIDFIPPLRIREMNFSNNKISTIADLSMHASLHTLLLDFNEIEEISGLENCASLKNLSISNNRISKITGLSNLNLKQLDLSYNDIRRIENLQDLEFIQYLNLSFNNIRSLRGLQEHGYLEEINLHKNQILDLSEIRYLRDLRMLRILNLSENPIKEIESYRISAVFKLSKLVELDEMQVTPEEKVHACNFFQPSKELSATKDHMYNLMKFYQQPQRLMDSSLPILE-PYPMLIITGPLGLSKKELVKQLSTEFSNFFSKVKGHTT-----AAVNTEEFYHVTEDEFETMRFKGEFLQTCTVCGVYHGISRSEIENVAKTGLAAVLTTTIDGVMGFKCTHYEPRVILVLPKDIEDFKQELYDSNRYNETEIDAALKNVNFCTNLHMERPGYFDTVITTDSYEERYGNLKETVLDFLGLNSSSSR 549
            D  + +E +   L  +G S SGT QVYLNLTL   ++ D+S L  Y  +Q LDLS N++EDLS + C+P+L+ LN S N LT   +F PP  +++ +FS+N+IS I DLS + +L  L+LD NEIEEISGLE C +L +LS++NN+I+ I GL+ L +K L LS N I  I  L+DL+ +Q L+LS N I SL+GL+ H  LE INL  N+I +L EI Y+++L +LR+LNL ENPI+E   Y    +F L +L ELD+ ++  EEKV A N + P  E+ A +DH+ +++    QPQR+ DS+LP L+ PYPMLI+ GP    K+EL  +L  +FS +F     HTT        +  +++ +++D F+ M   G+F+ T +     +G++R  +E +A+ GLA+ +   I+GV   K +++EPR ILV+P + E ++  L     ++  EI+ A+  V+    ++   PGYFD VI  D  +  Y  L + + ++LGL    ++
Sbjct:  103 DGVLREEAVAKALHHLGRSGSGTEQVYLNLTLSGCNLIDVSILCGYVHLQKLDLSANKIEDLSCVSCMPYLLELNASQNNLTTFFNFKPPKNLKKADFSHNQISEICDLSAYHALTKLILDGNEIEEISGLEMCNNLIHLSLANNKITTINGLNKLPIKILCLSNNQIEMITGLEDLKALQNLDLSHNQISSLQGLENHDLLEVINLEDNKIAELREIEYIKNLPILRVLNLLENPIQEKSEYWFFVIFMLLRLTELDQKKIKVEEKVSAVNKYDPPPEVVAAQDHLTHVVNSVMQPQRIFDSTLPSLDAPYPMLILAGPEACGKRELAHRLCRQFSTYFRYGACHTTRPPYFGEGDRVDYHFISQDVFDEMVNMGKFILTFSYGNHKYGLNRDTVEGIARDGLASCIHMEIEGVRSLKYSYFEPRYILVVPMNKEKYEGYLRRKGLFSRAEIEFAVSRVDLYIKINQNFPGYFDEVINADDLDVAYQKLSQLIREYLGLTEEPAK 608
The following BLAST results are available for this feature:
BLAST of TCONS_00067584-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LRGUK8.510e-12640.91Leucine-rich repeat and guanylate kinase domain-co... [more]
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