TCONS_00068105-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068105-protein
Unique NameTCONS_00068105-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length396

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068105-protein ID=TCONS_00068105-protein|Name=TCONS_00068105-protein|organism=Clytia hemisphaerica|type=polypeptide|length=396bp
MVTLEDFCKDKPIFNEHQVECNKYIICGALVPVILKCPEPLAWDSRRNIC
NWRRYTKCKTEPTTTATPKVTKHTLPSNTRVLAELKCDHTKCTLPNCRCQ
SPQVPGELPTSQVPQMVLISFDGPVNQANHEFFTETFDARLNPNRCPVKV
SFFVSDHGNDYKLTQKLHRKGHEIAVRSLAPDQTHGYWKNISYLDLVKDV
IGLKLKLTLNGINHVTGYRAPFHQSAGDTTFAALQEYGFEYDSSLPIRSK
EKQWWPFTMDSGIHSFDCLSPPCPKYSYPGLWELPLTSLSDGEESCRTYQ
SCTNYVQTSDGFYDFLMKNFFRLYQGNKAPLTLAGTASWLMSPSHPYRRQ
GFMKFLNHIGSFKDVYVVSGSQALDWIRSPVSSEKKIADRLKSWSC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042520XLOC_042520Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068105TCONS_00068105Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
IPR011330Glyco_hydro/deAcase_b/a-brl
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008061 chitin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 6..60
e-value: 9.3E-7
score: 38.5
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 8..58
e-value: 4.3E-8
score: 33.1
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 2..71
e-value: 1.3E-10
score: 40.5
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 5..60
score: 11.122
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 12..67
NoneNo IPR availableGENE3D3.20.20.370coord: 102..385
e-value: 8.0E-30
score: 103.6
IPR011330Glycoside hydrolase/deacetylase, beta/alpha-barrelSUPERFAMILY88713Glycoside hydrolase/deacetylasecoord: 88..381

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068105-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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