TCONS_00068274-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068274-protein
Unique NameTCONS_00068274-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length586

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068274-protein ID=TCONS_00068274-protein|Name=TCONS_00068274-protein|organism=Clytia hemisphaerica|type=polypeptide|length=586bp
MKVSDLELTKTKHRSAIQKMLTSLQGNLSRMNFWTFILVAIGYLVANPII
AQQVDGGYGPWSEWTPCEVTCGDGLQYRERGCNEPSPSNSGLDCEHLGPA
SETKPCRLRSCRGIDLKRGNFLKSVDIQKTYQFTFEIKPTGIKEGWTNVF
HGYNLDGNCCHFGQRIPALFMRSNTSRLMTVVPVGNNSRYQVNEWLPMHE
ATNVTIRQSLRADGTYRFALYYNETRIDMSVNTEPRVYKNVSLYASDKWY
QPSQVELGYFNVESPIEPDYFKPQRGFIRQHIPLMDRTYEISFTIQPNKA
HYGNEINGVFRISHNETLGSNCCKKGSNIPNLLITDRCKLYILNDGNKPV
SRTLNPFRMTSVKIRQELTSFGLYSYTIHLDGKEVHQVFNQNPATYKGNT
LYTSDPYHNAADVIVQDLKIVSPLPMNVYVPRKNNYITNIPVVEKAFRYT
MEIKPVGVRPGWTSIFHATRNVKGNRNCCGYGSRIPALFFHSNTTKLHTT
ASINGRGNFYINNDMDMDRFTVVTIEQSRQHDGQYRFSLMFDYIEVYTVI
NKQPEVFKDVSIYIGDPWYEPSNVVVRNFHFENLHS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042614XLOC_042614Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068274TCONS_00068274Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 58..112
e-value: 5.5E-12
score: 55.8
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 59..111
e-value: 1.1E-10
score: 41.5
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 54..111
e-value: 8.7E-15
score: 54.3
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 55..112
score: 13.057
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 53..111

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068274-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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