TCONS_00068785-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068785-protein
Unique NameTCONS_00068785-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length202

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068785-protein ID=TCONS_00068785-protein|Name=TCONS_00068785-protein|organism=Clytia hemisphaerica|type=polypeptide|length=202bp
MGDVLEIGDRLLISIDDDDYLEDSVETKTTLKEKGKQDNINDLKATKNES
DIEETSKEDINDSSEETDSATEIEDIIKEAVDRNKDEEKVVNEEGTKLNE
KKTRKKSRRVWKTSEQRMYLTYFYNNESQYPSKKEKLQLSNDLQISTKQV
NTWFHNRRAADRKKAKEELSLVTMVRIERWENLYGMIAPNKRTKRKSSEK
TS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042894XLOC_042894Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068785TCONS_00068785Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR017970Homeobox_CS
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 104..168
e-value: 2.7E-10
score: 50.2
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 107..163
e-value: 8.2E-13
score: 47.9
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 103..164
score: 15.24
NoneNo IPR availableGENE3D1.10.10.60coord: 99..170
e-value: 4.0E-14
score: 51.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..72
NoneNo IPR availableCDDcd00086homeodomaincoord: 106..164
e-value: 1.78942E-10
score: 52.6309
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 139..162
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 102..167

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068785-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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