TCONS_00070230-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070230-protein
Unique NameTCONS_00070230-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length231

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070230-protein ID=TCONS_00070230-protein|Name=TCONS_00070230-protein|organism=Clytia hemisphaerica|type=polypeptide|length=231bp
FFREMVLIIHGFRSQVSALQFEWAWQNPLKSKRLNHMKKLRGEKKFDLKL
RALSEMLNTGPWNRLPLTIQWLKQEYQQNFPVNKPPPIHMPIAYGPLRFA
KETSQNTHENVQKETSKLCYFCNNEKEGTKEEKYLSCIVKSCEYVGHITC
YAQHFLTTDKSDDTCPNLLPVSGVCPGCKQEILWGDLVRQRQYTLEEADE
GSGDGSETEDGMFSAPPSQDDDSENEFDQFQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043735XLOC_043735Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070230TCONS_00070230Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..231

Blast
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BLAST of TCONS_00070230-protein vs. Swiss-Prot (Human)
Match: SLX1 (Structure-specific endonuclease subunit SLX1 OS=Homo sapiens GN=SLX1A PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.271e-40
Identity = 79/208 (37.98%), Postives = 111/208 (53.37%), Query Frame = 0 
Query:    4 EMVLIIHGFRSQVSALQFEWAWQNPLKSKRLNHM-KKLRGEKKFDLKLRALSEMLNTGPWNRLPLTIQWLKQEYQQNFPVNKPPPIHMPIAYGPLRFAKETSQNTH--------ENVQKETSKLCYFCNNEKEGTKEEKYLSCIVKSCEYVGHITCYAQHFLTTDKSDDTCPNLLPVSGVCPGCKQEILWGDLVRQRQYTLEEADEGS 202
            EMVL++HGF S V+AL+FEWAWQ+P  S+RL H+  +LRGE  F   LR L+ ML   PW RLPLT++W++ + +Q+  +  PPP H+P+A+GP        +           E  Q +    C  C    +   EE  L C    C    H+ C A+ FL  +        LLP+ G CP C++ +LWGDL+   Q   E+  E S
Sbjct:   64 EMVLVVHGFPSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWARLPLTLRWVRPDLRQDLCL--PPPPHVPLAFGPPPPQAPAPRRRAGPFDDAEPEPDQGDPGACCSLCAQTIQ--DEEGPLCCPHPGCLLRAHVICLAEEFLQEEPG-----QLLPLEGQCPCCEKSLLWGDLIWLCQMDTEKEVEDS 262
The following BLAST results are available for this feature:
BLAST of TCONS_00070230-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SLX11.271e-4037.98Structure-specific endonuclease subunit SLX1 OS=Ho... [more]
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