Sox15 protein (polypeptide) - C. hemisphaerica

Overview
NameSox15 protein
Unique NameTCONS_00070453-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length345

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070453-protein ID=TCONS_00070453-protein|Name=Sox15 protein|organism=Clytia hemisphaerica|type=polypeptide|length=345bp
MKRVRSKNLSVSNKARSMEHTPQDMQELNEEMFSYGMEHAPHSPSDHRHR
HGSTSMTMQSDFSDESGVDKSDKIKRPMNAFMLWSKLRRREISKNDPTIH
NAQISKLLGEEWKVLSTEDKQPFLRESQKLMAKHKKEHPNYRYKPRKNKQ
ERGHTSGGGSYHQKAFSLPSQAKPYMKYSSHHHHYRPSQSRSMVDDRRPP
SPPTHHPVVYYQYRKCHVPGCYDCEYQRAYESHGPSPPSFCCRGSGYEKS
NTHASRRCMCCSPPPYHQPTCMGCNRQSPPPPSSNQQRNNSFTVESLIND
RGYNSSGKSTCTSSCSNGSTSPSTSLRSSAENDTKGSEGSGPEES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043872XLOC_043872Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070453TCONS_00070453Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 73..143
e-value: 5.8E-24
score: 95.6
IPR009071High mobility group box domainGENE3D1.10.30.10coord: 67..186
e-value: 9.1E-26
score: 89.7
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 74..142
e-value: 5.3E-23
score: 81.1
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 74..142
score: 20.712
IPR009071High mobility group box domainSUPERFAMILY47095HMG-boxcoord: 73..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableCDDcd01388SOX-TCF_HMG-boxcoord: 73..144
e-value: 2.16334E-27
score: 101.991

Blast
[Close]
BLAST of Sox15 protein vs. Swiss-Prot (Human)
Match: SOX14 (Transcription factor SOX-14 OS=Homo sapiens GN=SOX14 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.602e-26
Identity = 42/77 (54.55%), Postives = 66/77 (85.71%), Query Frame = 0 
Query:   71 SDKIKRPMNAFMLWSKLRRREISKNDPTIHNAQISKLLGEEWKVLSTEDKQPFLRESQKLMAKHKKEHPNYRYKPRK 147
            SD IKRPMNAFM+WS+ +RR++++ +P +HN++ISK LG EWK+LS  +K+P++ E+++L A+H KEHP+Y+Y+PR+
Sbjct:    5 SDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRR 81
The following BLAST results are available for this feature:
BLAST of Sox15 protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SOX147.602e-2654.55Transcription factor SOX-14 OS=Homo sapiens GN=SOX... [more]
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