TCONS_00070607-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070607-protein
Unique NameTCONS_00070607-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length275

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070607-protein ID=TCONS_00070607-protein|Name=TCONS_00070607-protein|organism=Clytia hemisphaerica|type=polypeptide|length=275bp
MLENDAVVISEENNAVTISEESIYQPSRLSENYTESSTRLRSAENKNNDL
SQIESLIQNKKTVENDNVNALYRDMENQTNDEIEASVEKQKVKRKSQTLK
SQANEKIKPAYLCKTCLKYYTSKSRLDRHIQTHTKPYQCKDCGKFFSQQK
HLKIHHDNIHKGIKYFKCTECDKGFVTKLRLDAHMRSHQGIKPFKCQVCG
LCFSWKRSLVTHEKTHQGDDPFICGECGKEFKERKELKVHTGEFHKGGKP
FYCCKCNRNFSRRSHLTRHYASHHR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043939XLOC_043939Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070607TCONS_00070607Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 251..273
e-value: 0.96
score: 18.5
coord: 137..160
e-value: 0.025
score: 23.7
coord: 166..188
e-value: 2.6E-4
score: 30.3
coord: 111..133
e-value: 0.17
score: 21.0
coord: 222..245
e-value: 0.17
score: 21.0
coord: 194..216
e-value: 0.0037
score: 26.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 196..216
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 168..188
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 139..160
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 253..274
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 113..133
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 224..245
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 222..250
score: 13.422
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 166..193
score: 14.233
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 194..221
score: 13.63
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 251..275
score: 11.676
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 137..165
score: 13.11
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 111..138
score: 10.866
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 175..231
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 221..273
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 135..188
NoneNo IPR availableGENE3D3.30.160.60coord: 234..274
e-value: 9.7E-14
score: 51.0
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 137..160
e-value: 1.1E-4
score: 22.3
coord: 251..273
e-value: 0.012
score: 16.0
coord: 222..243
e-value: 0.0034
score: 17.7
NoneNo IPR availableGENE3D3.30.160.60coord: 128..146
e-value: 1.2E-8
score: 34.3
NoneNo IPR availableGENE3D3.30.160.60coord: 193..207
e-value: 6.7E-11
score: 41.7
NoneNo IPR availableGENE3D3.30.160.60coord: 118..127
e-value: 0.038
score: 13.7
NoneNo IPR availableGENE3D2.40.155.10coord: 167..192
e-value: 3.6E-15
score: 56.2
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 166..188
e-value: 4.5E-4
score: 20.7
NoneNo IPR availableGENE3D3.30.160.60coord: 208..233
e-value: 1.3E-15
score: 57.1
NoneNo IPR availableGENE3D3.30.60.60coord: 21..117
e-value: 3.7E-5
score: 23.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 147..166
e-value: 4.1E-9
score: 36.0

Blast
[Close]
BLAST of TCONS_00070607-protein vs. Swiss-Prot (Human)
Match: OZF (Zinc finger protein OZF OS=Homo sapiens GN=ZNF146 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.419e-39
Identity = 73/182 (40.11%), Postives = 104/182 (57.14%), Query Frame = 0 
Query:   94 RKSQTLKSQANEKIKPAYLCKTCLKYYTSKSRLDRHIQTHT--KPYQCKDCGKFFSQQKHLKIHHDNIHKGIKYFKCTECDKGFVTKLRLDAHMRSHQGIKPFKCQVCGLCFSWKRSLVTHEKTHQGDDPFICGECGKEFKERKELKVHTGEFHKGGKPFYCCKCNRNFSRRSHLTRHYASH 273
            +KS  ++ Q     +  ++CK C K ++ KS L  H + H   KP++C +CG  F Q+K+L I H NIH G K ++C EC K F  +  L  H+R H G KP++C VCG  FS   SL  H ++H G+ P+ C ECGK F +   L +H    H G KP+ C +C + FS++SH  RH   H
Sbjct:  111 QKSNLIRHQRTHTGEKPFVCKECGKTFSGKSNLTEHEKIHIGEKPFKCSECGTAFGQKKYL-IKHQNIHTGEKPYECNECGKAFSQRTSLIVHVRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEKPYGCNECGKAFSQFSTLALHL-RIHTGKKPYQCSECGKAFSQKSHHIRHQKIH 290

HSP 2 Score: 132.109 bits (331), Expect = 6.287e-37
Identity = 70/166 (42.17%), Postives = 97/166 (58.43%), Query Frame = 0 
Query:  110 AYLCKTCLKYYTSKSRLDRHIQTHT--KPYQCKDCGKFFSQQKHLKIHHDNIHKGIKYFKCTECDKGFVTKLRLDAHMRSHQGIKPFKCQVCGLCFSWKRSLVTHEKTHQGDDPFICGECGKEFKERKELKVHTGEFHKGGKPFYCCKCNRNFSRRSHLTRHYASH 273
             + CK C K ++ KS L  H   HT  KP++C +CGK FSQ++++ I H N H G K F+C EC K F  K  L  H + H G KPF+C+ CG  F  K +L+ H++TH G+ PF+C ECGK F  +  L  H  + H G KPF C +C   F ++ +L +H   H
Sbjct:   15 PFACKVCGKVFSHKSNLTEHEHFHTREKPFECNECGKAFSQKQYV-IKHQNTHTGEKLFECNECGKSFSQKENLLTHQKIHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFVCKECGKTFSGKSNLTEHE-KIHIGEKPFKCSECGTAFGQKKYLIKHQNIH 178

HSP 3 Score: 82.0333 bits (201), Expect = 3.327e-18
Identity = 46/115 (40.00%), Postives = 62/115 (53.91%), Query Frame = 0 
Query:  159 IHKGIKYFKCTECDKGFVTKLRLDAHMRSHQGIKPFKCQVCGLCFSWKRSLVTHEKTHQGDDPFICGECGKEFKERKELKVHTGEFHKGGKPFYCCKCNRNFSRRSHLTRHYASH 273
            I+ G   F C  C K F  K  L  H   H   KPF+C  CG  FS K+ ++ H+ TH G+  F C ECGK F +++ L  H  + H G KPF C  C + F ++S+L RH  +H
Sbjct:    9 IYSGENPFACKVCGKVFSHKSNLTEHEHFHTREKPFECNECGKAFSQKQYVIKHQNTHTGEKLFECNECGKSFSQKENLLTHQ-KIHTGEKPFECKDCGKAFIQKSNLIRHQRTH 122
The following BLAST results are available for this feature:
BLAST of TCONS_00070607-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OZF1.419e-3940.11Zinc finger protein OZF OS=Homo sapiens GN=ZNF146 ... [more]
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