TCONS_00071141-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071141-protein
Unique NameTCONS_00071141-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length726

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071141-protein ID=TCONS_00071141-protein|Name=TCONS_00071141-protein|organism=Clytia hemisphaerica|type=polypeptide|length=726bp
ELSLKQEKLVDESTKRRRALEHEITQTLTTQLELDKVSEAFREAHQARQE
LLEQWENTIKQMQRRDNEIDEASLRLMELRVNVKTKQEDMKDRQQFLDDE
LNNNKEKEKKISMAERNAAKLRLEYQNIENSRQQFQDELETLKYKVDRTA
KDLESTRKKAHELKNEVAIRQDKLSRAVDVKEELIEQLTLAEDSKMTAEE
RSDRLEAALKKEQQRIVDVEKELAKLREMQFKKTQDLYQVRQMETNTNAE
IHGAKAASRNLSSKLYKLDQESLKQQEIVYNQDFQLQQAERKLIRLQGDR
TNEEKNQLNEKIKQLTGILEGHQNKQTMLTAQLKKLGDDLRRANRDLSKG
EDETKNLTNKIGELTLHNDSSERELRNIKNKKEDLMVDENLLKLEIKRLR
DQLFNRATEVLSLEDRRLLLETAMKERRQEIYIHTDMLKAQVKTSEDERQ
KISAELHERISKIEKLRKRYEILMVSMAPPEGEEEKTQAYYVIKAAQEKE
ELQRTGDQLDAKIRKAEKEIRALKNTVKLMNDRNSTYRKSFNNVEETSEE
YEKKMQLEEQLRAAMDKLKYKKRQMKELQEDLRVMQATAESLTVDENELV
VTMEEKQRTIDSLQKELDVQEEKKERADKMTRKVIRDVKGSSTASKKSKK
GFEEGEADIKVRELRDFNNSLMKKLGLICRDYPDIAPVLTMYCQQSGLPV
PPSPGPGSSRGSSTTGSVRSNLSSAR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044221XLOC_044221Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071141TCONS_00071141Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 34..89
NoneNo IPR availableCOILSCoilCoilcoord: 286..325
NoneNo IPR availableCOILSCoilCoilcoord: 333..402
NoneNo IPR availableCOILSCoilCoilcoord: 541..630
NoneNo IPR availableCOILSCoilCoilcoord: 492..533
NoneNo IPR availableCOILSCoilCoilcoord: 181..229
NoneNo IPR availableCOILSCoilCoilcoord: 97..173
NoneNo IPR availableGENE3D1.20.5.50coord: 481..627
e-value: 8.4E-4
score: 18.6
NoneNo IPR availableGENE3D1.20.5.340coord: 349..479
e-value: 0.04
score: 13.2
NoneNo IPR availableGENE3D1.10.287.620coord: 99..244
e-value: 0.023
score: 13.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 694..726

Blast
[Close]
BLAST of TCONS_00071141-protein vs. Swiss-Prot (Human)
Match: CCD39 (Coiled-coil domain-containing protein 39 OS=Homo sapiens GN=CCDC39 PE=2 SV=3)

HSP 1 Score: 521.546 bits (1342), Expect = 1.394e-173
Identity = 316/716 (44.13%), Postives = 469/716 (65.50%), Query Frame = 0 
Query:    2 LSLKQEKLVDESTKRRRALEHEITQTLTTQLELDKVSEAFREAHQARQELLEQWENTIKQMQRRDNEIDEASLRLMELRVNVKTKQEDMKDRQQFLDDELNNNKEKEKKISMAERNAAKLRLEYQNIENSRQQFQDELETLKYKVDRTAKDLESTRKKAHELKNEVAIRQDKLSRAVDVKEELIEQLTLAEDSKMTAEERSDRLEAALKKEQQRIVDVEKELAKLREMQFKKTQDLYQVRQMETNTNAEIHGAKAASRNLSSKLYKLDQESLKQQEIVYNQDFQLQQAERKLIRLQGDRTNEEKNQLNEKIKQLTGILEGHQNKQTMLTAQLKKLGDDLRRANRDLSKGEDETKNLTNKIGELTLHNDSSERELRNIKNKKEDLMVDENLLKLEIKRLRDQLFNRATEVLSLEDRRLLLETAMKERRQEIYIHTDMLKAQVKTSEDERQKISAELHERISKIEKLRKRYEILMVSMAPPEGEEEKTQAYYVIKAAQEKEELQRTGDQLDAKIRKAEKEIRALKNTVKLMNDRNSTYRKSFNNVEETSEEYEKKMQLEEQLRAAMDKLKYKKRQMKELQEDLRVMQATAESLTVDENELVVTMEEKQRTIDSLQKELDVQEEKKERADKMTRKVIRDVKGSSTASKKSKKGFEEGEADIKVRELRDFNNSLMKKLGLICRDYPDIAPVLTMYCQQSGLPVPPSPGPGSSRGSSTTGS 717
            L+L+ E+L  E  ++R+ L++E+T+T++ QLELDK ++ FR+ H  RQEL++QWENTI+QMQ+RD +ID  +L L  ++   + K+  +K++ +FL+ E+ NN E EK+IS+A+R   K R  YQ+ E SR Q + EL++LK  V+RT+ DLE+ RK   ++K ++     +L +  +  E +  +L    +  M+ EE++  LE  LK+E++ + +V+ +L  ++ + FKK Q+L      E    +EI G +++ ++L+ +L KLD E+LKQQEI+Y+QDF +QQ ER++ RL+G+  +EEK  L  KI +L   LE  ++   +L  Q+KKL +DL    +  SK  DE ++L  KI EL L  D SE+EL   K  K+DLM+++NLLKLE+KR R+ L ++A EVLSLE R+  L TAM+ER +EI +H  ML +Q++  + ER+ IS E  ER+SKIEKL+ RYEIL V M PPEGEEEKTQAYYVIKAAQEKEELQR GD LDAKI KAEKEI AL+NT++++N  N+ Y++SF  V  +S+EYE K+QLEEQ RA  +K +YK+RQ++ELQED++ M+ T + +    N +   + EKQ     L KE + Q+ K ER  K   K+ ++++       K  K     E DIK+RE++ F+  + + L  I  +  +I  +L  Y QQSGL +P +   G SR SS + S
Sbjct:  174 LTLQLERLTLECNQKRKILDNELTETISAQLELDKAAQDFRKIHNERQELIKQWENTIEQMQKRDGDIDNCALELARIKQETREKENLVKEKIKFLESEIGNNTEFEKRISVADRKLLKCRTAYQDHETSRIQLKGELDSLKATVNRTSSDLEALRKNISKIKKDIHEETARLQKTKNHNEIIQTKLKEITEKTMSVEEKATNLEDMLKEEEKDVKEVDVQLNLIKGVLFKKAQELQTETMKEKAVLSEIEGTRSSLKHLNHQLQKLDFETLKQQEIMYSQDFHIQQVERRMSRLKGEINSEEKQALEAKIVELRKSLEEKKSTCGLLETQIKKLHNDLYFIKKAHSKNSDEKQSLMTKINELNLFIDRSEKELDKAKGFKQDLMIEDNLLKLEVKRTREMLHSKAEEVLSLEKRKQQLYTAMEERTEEIKVHKTMLASQIRYVDQERENISTEFRERLSKIEKLKNRYEILTVVMLPPEGEEEKTQAYYVIKAAQEKEELQREGDCLDAKINKAEKEIYALENTLQVLNSCNNNYKQSFKKVTPSSDEYELKIQLEEQKRAVDEKYRYKQRQIRELQEDIQSMENTLDVIEHLANNVKEKLSEKQAYSFQLSKETEEQKPKLERVTKQCAKLTKEIRLL-----KDTKDETMEEQDIKLREMKQFHKVIDEMLVDIIEENTEIRIILQTYFQQSGLELPTASTKG-SRQSSRSPS 883
The following BLAST results are available for this feature:
BLAST of TCONS_00071141-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCD391.394e-17344.13Coiled-coil domain-containing protein 39 OS=Homo s... [more]
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