TCONS_00071247-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00071247-protein
Unique Name	TCONS_00071247-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	366

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00071247-protein ID=TCONS_00071247-protein|Name=TCONS_00071247-protein|organism=Clytia hemisphaerica|type=polypeptide|length=366bp
MQKAKEYDWKDSNMALFGSDTEKEVKKESAEQEKAWHGSGQKVGVEIWRI
NKFKIEKWPIEDYGKFYSGDSYIILNTYKDADEDELNYDLHFWIGKYSTQ
DEYGTAAYKTVELDTFHNDKPVQHREVQGHESSLFKTYFETITLMKGGAA
TGFRHVKPTEYKPRLFQVVGERKKIDVLEIPMKKGNVNSDDVFIFDLGLQ
IYQLNGSNANKDEKFRATQYVQKIKSERGGKAKLEVLEEGDTASDHEIFK
SLKDGVSRNSVKRRAPPPPTQKGMYKLSDASGKLQFSTISTGSLNKSGLD
TKDVFLVDGGSHLYVWVGNGASRAERQNGMVFATKFLQDKKNPLCPVTVM
NEKKANKNQVFQALFA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044287	XLOC_044287	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00071247	TCONS_00071247	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007122	Villin/Gelsolin
IPR007123	Gelsolin-like_dom
IPR029006	ADF-H/Gelsolin-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0051015	actin filament binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0051015	actin filament binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007122	Villin/Gelsolin	PRINTS	PR00597	GELSOLIN	coord: 122..142 score: 32.9 coord: 62..78 score: 55.08 coord: 296..318 score: 36.76 coord: 175..195 score: 26.62
IPR007122	Villin/Gelsolin	SMART	SM00262	VILL_6	coord: 43..142 e-value: 6.9E-26 score: 102.0 coord: 273..364 e-value: 5.2E-7 score: 39.3 coord: 161..256 e-value: 3.8E-10 score: 49.7
IPR007123	Gelsolin-like domain	PFAM	PF00626	Gelsolin	coord: 61..135 e-value: 1.1E-15 score: 57.2 coord: 177..241 e-value: 2.8E-8 score: 33.4 coord: 294..354 e-value: 2.9E-9 score: 36.6
IPR029006	ADF-H/Gelsolin-like domain	GENE3D	3.40.20.10		coord: 264..366 e-value: 1.5E-14 score: 53.3 coord: 153..263 e-value: 3.3E-17 score: 61.9
IPR029006	ADF-H/Gelsolin-like domain	GENE3D	3.40.20.10		coord: 27..152 e-value: 4.1E-31 score: 106.8
None	No IPR available	CDD	cd11289	gelsolin_S2_like	coord: 162..252 e-value: 5.95471E-30 score: 110.02
None	No IPR available	CDD	cd11290	gelsolin_S1_like	coord: 36..148 e-value: 4.61559E-53 score: 172.408
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 153..241
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 249..354
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 33..172

Blast

[Close]

BLAST of TCONS_00071247-protein vs. Swiss-Prot (Human)
Match: AVIL (Advillin OS=Homo sapiens GN=AVIL PE=1 SV=3)

HSP 1 Score: 209.149 bits (531), Expect = 6.737e-61
Identity = 125/333 (37.54%), Postives = 187/333 (56.16%), Query Frame = 0

Query:   44 GVEIWRINKFKIEKWPIEDYGKFYSGDSYIILNTYKDADEDELNYDLHFWIGKYSTQDEYGTAAYKTVELDTFHNDKPVQHREVQGHESSLFKTYF-ETITLMKGGAATGFRHVKPTEYK-PRLFQVVGERKKIDVLEIPMKKGNVNSDDVFIFDLGLQIYQLNGSNANKDEKFRATQYVQKIKS-ERGGKAKLEVLEEGDTASDHEIFKSLKDGVSRNSVKRRAPPPPT----QKG---MYKLSDASGKLQFSTISTGSLNKSGLDTKDVFLVD-GGSHLYVWVGNGASRAERQNGMVFATKFLQDKKNPLCPVTVMNEKKANKNQVFQALF 365
            G+ +WRI K ++   P+  +G FY GD Y+IL+T + A    L+ D+HFWIGK S+QDE   AA  T +LD +    PVQHREVQ HES  F+ YF + I   +GG A+G +HV+   Y   RL  V G+R  I   E+ M   + N  DVF+ DLG  I Q NG  +N  E+ +A    + I+  ERGG+AK+ V+E    A+  E+ K L+D + R S+ +   P       QK    +Y +SD++G+L  + ++T  L +  L+  D +++D  G+ +YVW G GA++AE+Q  M  A  F++ K  P     V       ++ +F+ LF
Sbjct:   15 GIIVWRIEKMELALVPVSAHGNFYEGDCYVILSTRRVASL--LSQDIHFWIGKDSSQDEQSCAAIYTTQLDDYLGGSPVQHREVQYHESDTFRGYFKQGIIYKQGGVASGMKHVETNTYDVKRLLHVKGKR-NIRATEVEMSWDSFNRGDVFLLDLGKVIIQWNGPESNSGERLKAMLLAKDIRDRERGGRAKIGVIEGDKEAASPELMKVLQDTLGRRSIIKPTVPDEIIDQKQKSTIMLYHISDSAGQLAVTEVATRPLVQDLLNHDDCYILDQSGTKIYVWKGKGATKAEKQAAMSKALGFIKMKSYP-SSTNVETVNDGAESAMFKQLF 343

HSP 2 Score: 103.99 bits (258), Expect = 3.211e-24
Identity = 86/341 (25.22%), Postives = 161/341 (47.21%), Query Frame = 0

Query:   26 KKESAEQEKAWH-GSGQKVGVEIWRINKFKIEKWPIEDYGKFYSGDSYIILNTYKDADEDELNYDLHFWIGKYSTQDEYGTAAYKTVELDTFHNDKPVQHREVQGHESSLFKTYFETITLMKGGAATGFRHVKPTEYKPRLFQVVG-ERKKIDVLEIPMKKGNVNSDDVFIFDLGLQIYQLNGSNANKDEKFRATQYV-------QKIKSERGGKAKLEVLEEGDT--ASDHEIFKSLKDGVSRNSVKRRAPPPPTQKGMYKLSDASGKLQFSTISTGSLNKSGLDTKDVFLVDGGSHLYVWVGNGASRAERQNGMVFATKFLQDK---KNPLCPVTVMNE 352
            K E A QE+    G+G+   VE+WRI   ++     + YG FY GD Y++L TY+   +   ++ L+ W G++++QDE   +AY+ VE+D   +   VQ R   G E   F   F+   ++  G  +   + +P +   RLFQ+ G ++     +E+P    ++NS+DVF+     + Y   G  ++ DE+  A +         +   +E    A+   L  G T  A+D  + + + D  SR               +++ S+ +G  QF         +  L+  DV L+D    +++W+G  A+  E+++ +  A ++L      ++P  P+ ++ +
Sbjct:  380 KPEVAAQERMVDDGNGK---VEVWRIENLELVPVEYQWYGFFYGGDCYLVLYTYEVNGKP--HHILYIWQGRHASQDELAASAYQAVEVDRQFDGAAVQVRVRMGTEPRHFMAIFKGKLVIFEGGTSRKGNAEP-DPPVRLFQIHGNDKSNTKAVEVPAFASSLNSNDVFLLRTQAEHYLWYGKGSSGDERAMAKELASLLCDGSENTVAEGQEPAEFWDLLGGKTPYANDKRLQQEILDVQSR---------------LFECSNKTG--QFVVTEITDFTQDDLNPTDVMLLDTWDQVFLWIGAEANATEKESALATAQQYLHTHPSGRDPDTPILIIKQ 697

The following BLAST results are available for this feature:

BLAST of TCONS_00071247-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00071247-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AVIL	6.737e-61	37.54	Advillin OS=Homo sapiens GN=AVIL PE=1 SV=3	[more]

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TCONS_00071247-protein (polypeptide) - C. hemisphaerica