TCONS_00071262-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00071262-protein
Unique Name	TCONS_00071262-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	799

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00071262-protein ID=TCONS_00071262-protein|Name=TCONS_00071262-protein|organism=Clytia hemisphaerica|type=polypeptide|length=799bp
MGKPKGKTSKVKLGNKASNKKTNKNVGANKYQEKFQSAKIKAGKFKKKPA
INKKELMNGKIDYSRYKPEDDHDVDDMLESDEEDDMKSYLKQNANDMSFL
SKSLDKNSDGMKSYEAQPRSYSNVHKETDLKDDRVDLLPIKGATGLIRRK
GEQIEEQDNENEDGEGDGPEENDLLPIMEKEPMSVIEILAAHREQVVQKK
LQIAQLSMDIVENPYEKISQLKHLLKLAEKDEPLTIRKLALLSMLEIFKD
IIPSYNIRELSDDEQNAKVSRDVKKIRDYEQNLLKAYQRYLQSLEENIKV
CKKFVKKSRGSGAHHEKQKKSMGSLVITSMKCLAELIKNLPHFNFRKNII
NVLIPNIELSQDLEEAGQICSKAIKETLLADYNGHIALDVVTIIQNLAKS
KPTLSPLVLETLLCLRVDADLVHATEEKGNKIERLKAKREAIKKMSRKER
KRKKVEDKLNQELQEVEAVESRDKIGKTHTEILKRLFVIYFRVLKLGFKS
DLLGITLRGLARFSHLINIDFFGDLMNCLETVLKYEDLDTQDRLNCILTA
MKVLSGQGEALTIDPRQFYTELYNVLLNFDSEIESTCFDSVRHCLEIMLI
KRRKQVSHPQILGFLKRLSTMLLQMPIERSSDMFLLLRSIFQLYEKCDYL
LDNENFGRGVFQPDITNPEHSNADSTALWELQLLSRFYQNDAELYCKHVM
IGAPSHGPGSLPQRMLQRGASKPDFRTKKNVAETTDLDYFENLPERAQTT
RKQQQQSEIKFKSSIQRFGNETSSNKELYEKVDNELEKLLKTNLINGKK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044295	XLOC_044295	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00071262	TCONS_00071262	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011501	Noc3_N
IPR005612	CCAAT-binding_factor
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 432..472
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 749..776
IPR011501	Nucleolar complex-associated protein 3, N-terminal	PFAM	PF07540	NOC3p	coord: 198..290 e-value: 9.0E-31 score: 106.1
IPR005612	CCAAT-binding factor	PFAM	PF03914	CBF	coord: 544..689 e-value: 4.0E-15 score: 56.2
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 214..404 coord: 517..655

Blast

[Close]

BLAST of TCONS_00071262-protein vs. Swiss-Prot (Human)
Match: NOC3L (Nucleolar complex protein 3 homolog OS=Homo sapiens GN=NOC3L PE=1 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 2.010e-121
Identity = 261/733 (35.61%), Postives = 411/733 (56.07%), Query Frame = 0

Query:    7 KTSKVKLGNKASNKKTNKNVGANKY---QEKFQSAKIKAGKFKKKPAINKKELMNGKIDYSRYKPEDDHDVDDMLESDEEDDMKSYLKQNANDMSFLSKSLD----------KNSDGMKSYEAQPRSYSNVHKETDLKDDRVDLLPIKGATGLIRRKGEQIEEQDNENEDGEGDGPEENDLLPIMEKEPMSVIEILAAHREQVVQKKLQIAQLSMDIVENPYEKISQLKHLLKLAEKDEP---LTIRKLALLSMLEIFKDIIPSYNIRELSDDEQNAKVSRDVKKIRDYEQNLLKAYQRYLQSLEENIKVCKKFVKKSRGSGAHHEKQKKSMGSLVITSMKCLAELIKNLPHFNFRKNIINVLIPNIELSQDLEE-AGQICSKAIKETLLADYNGHIALDVVTIIQNLAKSKPT-LSPLVLETLLCLRVDADLVHATEEKGNKIERLKAKREAIKKMSRKERKRKKVEDKLNQELQEVEAVESRDKIGKTHTEILKRLFVIYFRVLKLGFKSDLLGITLRGLARFSHLINIDFFGDLMNCLETVLKYEDLDTQDRLNCILTAMKVLSGQGEALTIDPRQFYTELYNVLLNFDSEIESTCFDSVRHCLEIMLIKRRKQVSHPQILGFLKRLSTMLLQMPIERSSDMFLLLRSIFQLYEKCDYLLDNENFGRGVFQPDITNPEHSNADSTALWELQLLSRFYQNDAELYCKHVMIGAPSHGPGSLPQRMLQRGAS 721
            KTSKVKL NK  NK+  +     KY   Q K + A   A   K  P  N KE   GK      + E++    DM++   EDD++  +K     +SFL++ L           K+   +  YE  PR+      +T  + + + LLPIK  +G+I +  E+     N++E+ + +  E  + +     + +++ E L   ++++ +KK+ IA L+  I+ +P   I +LK L  +  + +P   +T+RKL ++S++E+FKDI PSY IR L++ E++ K  ++ +K+R++E+ L+  Y+ YL++LE+ +K  K+  +K + S     K  K +  + +   K L EL+  LPHFNF  NII +++P   L  D+ +   ++C +A+K+    D  G  +L V+ +I    K +   + P +L+T LCLR+    V    E  NK ++    +E  K +SR +RK KK E+KL +EL+E EA ES +K  K HTE L  +FV YFR+LK   +S LL   L GLA+F+HLIN++FF DL+  L T+++  DL  Q+ L+C+ TA  +LSGQG+ L IDP +FYT LY  L    +   +   + V  CL++ML KRRKQVS  + L F+KRL T+ L +    S  +    R +   + K D LLD+E+ G GVF P++  PE+ NA +TALWEL  L R Y    + +  H++ GAPS G G+L   + +R A+
Sbjct:   18 KTSKVKLENKLKNKQFKQQSTLKKYRKEQRKLRQAVKDAVSKKPIPLENPKEKRPGKRIEREEEEEEEALPLDMMD---EDDLQ-LMKDLGQRVSFLTRDLSSSEPVHAKKRKHERIIDKYEKIPRTL-----QTAPEKELIHLLPIKDKSGIIPQTREKPVTDSNKDEEDQEEERELEEEIIEDPIQELTIEEHLIERKKKLQEKKMHIAALASAILSDPENNIKKLKELRSMLMEQDPDVAVTVRKLVIVSLMELFKDITPSYKIRPLTEAEKSTKTRKETQKLREFEEGLVSQYKFYLENLEQMVKDWKQ--RKLKKSNVVSLKAYKGLAEVAV---KSLCELLVALPHFNFHNNIIVLIVP---LMNDMSKLISEMCCEAVKKLFKQDKLGQASLGVIKVISGFVKGRNYEVRPEMLKTFLCLRIKEVEVKKDTEDINKPKKFMTFKEKRKSLSRMQRKWKKAEEKLERELREAEASESTEKKLKLHTETLNIVFVTYFRILKKAQRSPLLPAVLEGLAKFAHLINVEFFDDLLVVLHTLIESGDLSYQESLHCVQTAFHILSGQGDVLNIDPLKFYTHLYKTLFKLHAGATNEGVEIVLQCLDVMLTKRRKQVSQQRALAFIKRLCTLALHVLPNSSIGILATTRILMHTFPKTDLLLDSESQGSGVFLPELDEPEYCNAQNTALWELHALRRHYHPIVQRFAAHLIAGAPSEGSGALKPELSRRSAT 733

The following BLAST results are available for this feature:

BLAST of TCONS_00071262-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00071262-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NOC3L	2.010e-121	35.61	Nucleolar complex protein 3 homolog OS=Homo sapien...	[more]

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TCONS_00071262-protein (polypeptide) - C. hemisphaerica