TCONS_00071335-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071335-protein
Unique NameTCONS_00071335-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length294

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071335-protein ID=TCONS_00071335-protein|Name=TCONS_00071335-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MSFGSPIIDLTGKLIIKAQLGSDIRKIPIHNEEITYDELLLMMQRLFSGK
IKSSDDVLMKYKDEDGDLITLYDSSDLMFAKSLSRYLKLTLTVNGKPQPL
QDDQIKEIKSELTVCRDRINELMTRLDLLAEVAPSSRDESLPRDPEQRQQ
TNEPVRENTNPTSSQVNQQREEQILANRANAALFDPIRKTPEPSQPDSTS
KDPFANIGASQPPRQQSYSPVSSSTNIQQQQQQPAPQQQQQAPAPTQSST
YNPQQQPTQSYSPAPPSNQQXQLIILNNSQHSHIRRHHLPTSNK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044330XLOC_044330Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071335TCONS_00071335Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom
IPR034857PB1_TFG
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 105..125
NoneNo IPR availableGENE3D3.10.20.90coord: 10..117
e-value: 9.6E-17
score: 60.4
NoneNo IPR availableSUPERFAMILY54277CAD & PB1 domainscoord: 5..101
IPR000270PB1 domainSMARTSM00666PB1_newcoord: 13..96
e-value: 3.6E-11
score: 53.1
IPR000270PB1 domainPFAMPF00564PB1coord: 16..93
e-value: 4.9E-9
score: 35.9
IPR000270PB1 domainPROSITEPS51745PB1coord: 13..94
score: 17.124
IPR034857TFG, PB1 domainCDDcd06401PB1_TFGcoord: 14..94
e-value: 6.96498E-36
score: 124.162

Blast
[Close]
BLAST of TCONS_00071335-protein vs. Swiss-Prot (Human)
Match: TFG (Protein TFG OS=Homo sapiens GN=TFG PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.406e-52
Identity = 90/181 (49.72%), Postives = 128/181 (70.72%), Query Frame = 0 
Query:    8 IDLTGKLIIKAQLGSDIRKIPIHNEEITYDELLLMMQRLFSGKIKSSDDVLMKYKDEDGDLITLYDSSDLMFAKSLSRYLKLTLTVNGKPQPLQDDQIKEIKSELTVCRDRINELMTRLDLLAEVAPSSRDESLPRDPEQRQQTNEPVRENTNPTSSQVNQQREEQILANRANAALFDPIR 188
            +DL+GKLIIKAQLG DIR+IPIHNE+ITYDEL+LMMQR+F GK+ S+D+V +KYKDEDGDLIT++DSSDL FA   SR LKLTL VNG+P+PL+  Q+K ++ EL   R+++N L+  L+   E  PS+   ++P         N+ V      ++S  + ++  Q++A  A+ + FDP++
Sbjct:    5 LDLSGKLIIKAQLGEDIRRIPIHNEDITYDELVLMMQRVFRGKLLSNDEVTIKYKDEDGDLITIFDSSDLSFAIQCSRILKLTLFVNGQPRPLESSQVKYLRRELIELRNKVNRLLDSLEPPGEPGPST---NIPE--------NDTVDGREEKSASDSSGKQSTQVMA--ASMSAFDPLK 172
The following BLAST results are available for this feature:
BLAST of TCONS_00071335-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TFG1.406e-5249.72Protein TFG OS=Homo sapiens GN=TFG PE=1 SV=2[more]
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