TCONS_00071478-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071478-protein
Unique NameTCONS_00071478-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length513

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071478-protein ID=TCONS_00071478-protein|Name=TCONS_00071478-protein|organism=Clytia hemisphaerica|type=polypeptide|length=513bp
RVRLKGKYSSHLIFCWANMRLFNRLSCSTKRIRPTIDTNDDFRKFGKKMV
DLIADYNENVPNMSVLPDVKSGYLVKLLPDEAPMEPESWESVCEDFEKAI
VPGITPWNSPNFHAYYPTANSYAAVMGGMLCDALGCVGFTWIASPACTEL
ERLTMDWLAKMFGLPEVFQHAGEGNGGGVIQGSTSESTLIAILAAKHRKM
IEYDHDEVLASKLVAYTSRQSHSSVEKGVRLAGTKLRLVDTDERFRMRGD
ELRKAIEEDKAKGLIPFFVGASVGTTNVCAFDALDEISAVSGEEKMWMHI
DAAYAGAAMICPEFRYLVKGIENTDSLVVSCHKWLMVNFACAAMFVRDSL
DLINLFDINPLYLKHEYENEISDFRHWQIPLGRRFRSLKLWMVLKSYGVK
GLQENIRCQIQQAKFFEEMVRKDARFEVINDVLMGLVCFRLIGDNALNED
LNKRVNEARKIHMTPATVDGQFVLRFVVASRLTEDKDIQFAWDEIKDHAG
ILLNNEEPKKRGV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044379XLOC_044379Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071478TCONS_00071478Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010977Aromatic_deC
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR015422PyrdxlP-dep_Trfase_sub2
IPR002129PyrdxlP-dep_de-COase
IPR021115Pyridoxal-P_BS
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
GO:0019752carboxylic acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016831carboxy-lyase activity
GO:0003824catalytic activity
GO:0030170pyridoxal phosphate binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:0006520 cellular amino acid metabolic process
molecular_function GO:0016831 carboxy-lyase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010977Aromatic-L-amino-acid decarboxylasePRINTSPR00800YHDCRBOXLASEcoord: 65..82
score: 53.49
coord: 380..395
score: 71.43
coord: 423..442
score: 52.71
coord: 130..148
score: 62.11
coord: 109..128
score: 51.14
coord: 149..168
score: 58.57
coord: 176..196
score: 62.59
coord: 83..102
score: 45.29
coord: 42..61
score: 48.57
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 118..395
e-value: 2.5E-65
score: 219.7
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 396..503
e-value: 4.0E-30
score: 104.1
IPR002129Pyridoxal phosphate-dependent decarboxylasePFAMPF00282Pyridoxal_deCcoord: 72..441
e-value: 3.1E-136
score: 453.9
NoneNo IPR availableGENE3D1.20.1340.10coord: 38..117
e-value: 8.7E-30
score: 102.9
NoneNo IPR availableCDDcd06450DOPA_deC_likecoord: 112..498
e-value: 1.21289E-119
score: 357.284
IPR021115Pyridoxal-phosphate binding sitePROSITEPS00392DDC_GAD_HDC_YDCcoord: 326..347
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 40..500

Blast
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BLAST of TCONS_00071478-protein vs. Swiss-Prot (Human)
Match: DDC (Aromatic-L-amino-acid decarboxylase OS=Homo sapiens GN=DDC PE=1 SV=2)

HSP 1 Score: 516.153 bits (1328), Expect = 0.000e+0
Identity = 242/475 (50.95%), Postives = 330/475 (69.47%), Query Frame = 0 
Query:   40 DDFRKFGKKMVDLIADYNENVPNMSVLPDVKSGYLVKLLPDEAPMEPESWESVCEDFEKAIVPGITPWNSPNFHAYYPTANSYAAVMGGMLCDALGCVGFTWIASPACTELERLTMDWLAKMFGLPEVFQHAGEGNGGGVIQGSTSESTLIAILAAK----HRKMIEYDH--DEVLASKLVAYTSRQSHSSVEKGVRLAGTKLRLVDTDERFRMRGDELRKAIEEDKAKGLIPFFVGASVGTTNVCAFDALDEISAVSGEEKMWMHIDAAYAGAAMICPEFRYLVKGIENTDSLVVSCHKWLMVNFACAAMFVRDSLDLINLFDINPLYLKHEYENE--ISDFRHWQIPLGRRFRSLKLWMVLKSYGVKGLQENIRCQIQQAKFFEEMVRKDARFEVINDVLMGLVCFRLIGDNALNEDLNKRVNEARKIHMTPATVDGQFVLRFVVASRLTEDKDIQFAWDEIKDHAGILLNNE 506
             +FR+ GK+MVD +A+Y E +    V PDV+ GYL  L+P  AP EP+++E +  D EK I+PG+T W+SP F AY+PTA+SY A++  MLC A+GC+GF+W ASPACTELE + MDWL KM  LP+ F +   G GGGVIQGS SE+TL+A+LAA+    HR            +  KLVAY+S Q+HSSVE+   + G KL+ + +D  F MR   L++A+E DKA GLIPFF+ A++GTT  C+FD L E+  +  +E +W+H+DAAYAG+A ICPEFR+L+ G+E  DS   + HKWL+VNF C+AM+V+   DL   F ++P YLKH +++   I+D+RHWQIPLGRRFRSLK+W V + YGVKGLQ  IR  +Q +  FE +VR+D RFE+  +V++GLVCFRL G N +NE L +R+N A+KIH+ P  +  +FVLRF + SR  E   +Q AW+ IK+ A  +L  E
Sbjct:    4 SEFRRRGKEMVDYMANYMEGIEGRQVYPDVEPGYLRPLIPAAAPQEPDTFEDIINDVEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLELPKAFLNEKAGEGGGVIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIMEKLVAYSSDQAHSSVERAGLIGGVKLKAIPSDGNFAMRASALQEALERDKAAGLIPFFMVATLGTTTCCSFDNLLEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKKRTDLTGAFRLDPTYLKHSHQDSGLITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFESLVRQDPRFEICVEVILGLVCFRLKGSNKVNEALLQRINSAKKIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVLRAE 478
The following BLAST results are available for this feature:
BLAST of TCONS_00071478-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DDC0.000e+050.95Aromatic-L-amino-acid decarboxylase OS=Homo sapien... [more]
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