TCONS_00071576-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071576-protein
Unique NameTCONS_00071576-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length703

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071576-protein ID=TCONS_00071576-protein|Name=TCONS_00071576-protein|organism=Clytia hemisphaerica|type=polypeptide|length=703bp
RLDLLDENMDSLLKKAKIEVSDNHPDETEINQRYGRYTDIMHPKENHKRS
FTNREDRKWKPDSGGLLQIPYSFDGIKFNSPEKKIIEDAIAYVNQQISCY
DSVWVPYKFDQHSDKTRILFVKEDGCWSFIGKQSGNLIQKLGLDDPCIYK
GEIVHQMMHAMGVYHTHQRPDRDEFVEIQWQNLDDSAKDFNIEPNVDPNY
QQISKFDYGSLMHFKRNDQSINGKDTIVTKNPDAQSVIGQRDHLSEEDVK
ELNELLCPATNPVPATTTTTPTTSTTATTTTTPSTTTLTPTTTMTSPSTT
TTTTTPATTTTISETTTTTPKSTTTTTKTTSTVSTTTTAVSATTTTTPTT
TATTLSTSKTTAISTTIETTTAATFSTEPNTNKGKELLSIDFNKPLDFKK
QIWFGRKKDNKWILRGNCLDGPHCNSRRNILHTEKLKSFYSKMCHLDSTM
EESCERKCSLCNRNPIRNYCKNLRDGNYNHPTECDKYVACSGHITHLMSC
PSGLNYNVVLNQCFEPEKAGCSKKTGKCVNAAGGFFCRLGLRWNLLHCNS
ENKVKEIIAEKCPFSCQTCRNADNYVESTSQPNNVIHLSVPYYETTMTKT
QQKIQLCLQFKYNTTQTSFKLRFFGKQGEQKRNWQRQEHQGKPYHVLPGM
SGEGFDSYETTIEIQRNKHEENGRFRMFFSNRRRDKNTASIRIDDIKVFE
GQC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044473XLOC_044473Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071576TCONS_00071576Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR006026Peptidase_Metallo
IPR002557Chitin-bd_dom
IPR024079MetalloPept_cat_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
GO:0008061chitin binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0006030chitin metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
biological_process GO:0006508 proteolysis
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001506Peptidase M12APRINTSPR00480ASTACINcoord: 147..165
score: 42.54
coord: 205..220
score: 38.85
coord: 166..183
score: 43.33
coord: 244..257
score: 30.48
IPR001506Peptidase M12APFAMPF01400Astacincoord: 68..258
e-value: 9.8E-42
score: 142.6
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 55..210
e-value: 9.4E-16
score: 68.3
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 468..523
e-value: 3.3E-10
score: 49.9
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 470..521
e-value: 1.8E-10
score: 40.7
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 459..532
e-value: 5.0E-13
score: 48.2
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 467..523
score: 12.492
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 465..523
NoneNo IPR availableGENE3D2.60.120.200coord: 555..703
e-value: 8.6E-7
score: 28.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..331
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 57..255
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 50..259
e-value: 8.2E-38
score: 129.8
IPR034035Astacin-like metallopeptidase domainCDDcd04280ZnMc_astacin_likecoord: 69..255
e-value: 4.10108E-53
score: 180.46

Blast
[Close]
BLAST of TCONS_00071576-protein vs. Swiss-Prot (Human)
Match: MEP1A (Meprin A subunit alpha OS=Homo sapiens GN=MEP1A PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.633e-18
Identity = 64/201 (31.84%), Postives = 100/201 (49.75%), Query Frame = 0 
Query:   61 PDSGGLLQIPYSF-DGIKFNSPEKKIIEDAIAYVNQQI---SCYDSVWVPYKFDQHSDKTRILFVKEDGCWSFIGKQSGNLIQKLGLDDPCIYKGEIVHQMMHAMGVYHTHQRPDRDEFVEIQWQNLDDSAKDFNIEPNVDPNYQQI-SKFDYGSLMHFKRNDQSINGK-DTIVTKNPDAQSVIGQRDHLSEEDVKELNEL 255
            P++     IPY   D +  N+      + AI Y  +     SC D  + PY+     + + I+F + DGCWS +G Q  ++ Q + +   C YK  I H+++HA+G YH   R DRD++V I W  +  S    N +   D     + + +DY SLMH++    + N    TI  K P+  S+IGQR   S  D++ LN +
Sbjct:   71 PNTRWTFPIPYILADNLGLNA------KGAILYAFEMFRLKSCVD--FKPYE----GESSYIIFQQFDGCWSEVGDQ--HVGQNISIGQGCAYKAIIEHEILHALGFYHEQSRTDRDDYVNIWWDQI-LSGYQHNFDTYDDSLITDLNTPYDYESLMHYQPFSFNKNASVPTITAKIPEFNSIIGQRLDFSAIDLERLNRM 256
The following BLAST results are available for this feature:
BLAST of TCONS_00071576-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1A2.633e-1831.84Meprin A subunit alpha OS=Homo sapiens GN=MEP1A PE... [more]
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