TCONS_00071588-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00071588-protein
Unique Name	TCONS_00071588-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	540

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00071588-protein ID=TCONS_00071588-protein|Name=TCONS_00071588-protein|organism=Clytia hemisphaerica|type=polypeptide|length=540bp
MWLQIALAAIIVSFTAFYLYMKHRLSYWKRRGIPEDKGHFPFGSKHAWDF
VQGKMSFTQMTNFAYETHPGEKVVGTYDMFGSPGLVIRDPDIAKLILVKD
FDNFMERKPIHYNMYDSNSKNNRYFPYMLTELRGQQWKNVRSSLTPVFTS
GKLKNMIPLIHKVADNCETYLDKNIGVEFEAKELLKGYALDIIISTGFGY
ENDTLNNPENIFKKHADVMIGKTFSWKLIATILLFMICPRLLRWLDWAMF
DKNTVDFFAALIVKTIKERKESGQRRNDLIDVCVDILEKERKENEKSVED
EEGAKRRNDEMEKIIIANSLIMFLAGFDTVSNASSLMMYFLAKHQDCQER
LYQEVQEAIESTGSTNFDYATIMNMPYMEKFFQETLRMXSTIMNMPYMEK
FFQETFRMYPLTHLERCSKEEYKIPDTDIVIPKGIFVRYAATAVVKDEKY
YPNPEVFDPENYSAEKKVDRHPFVTGAFGHGPRNCIAQRFATMEVKIVIA
RLLSKYKIVPCSKTVDELIPDPSSRSGQPKGDIWVTVEKR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044480	XLOC_044480	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00071588	TCONS_00071588	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001128	Cyt_P450
IPR002401	Cyt_P450_E_grp-I
IPR017972	Cyt_P450_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0020037	heme binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 284..307
None	No IPR available	GENE3D	1.10.630.10		coord: 392..540 e-value: 3.0E-37 score: 127.9
None	No IPR available	GENE3D	1.10.630.10		coord: 18..391 e-value: 5.8E-56 score: 189.5
IPR001128	Cytochrome P450	PRINTS	PR00385	P450	coord: 485..496 score: 36.34 coord: 400..411 score: 30.76 coord: 325..342 score: 33.15 coord: 476..485 score: 51.33
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 390..523 e-value: 4.5E-36 score: 124.5 coord: 77..392 e-value: 1.1E-40 score: 139.7
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 27..207 coord: 395..540 coord: 234..354
IPR002401	Cytochrome P450, E-class, group I	PRINTS	PR00463	EP450I	coord: 475..485 score: 42.64 coord: 334..360 score: 19.79 coord: 440..464 score: 28.0 coord: 314..331 score: 31.7 coord: 485..508 score: 23.92
IPR017972	Cytochrome P450, conserved site	PROSITE	PS00086	CYTOCHROME_P450	coord: 478..487

Blast

[Close]

BLAST of TCONS_00071588-protein vs. Swiss-Prot (Human)
Match: CP3A4 (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4)

HSP 1 Score: 216.853 bits (551), Expect = 6.747e-64
Identity = 155/530 (29.25%), Postives = 253/530 (47.74%), Query Frame = 0

Query:   20 YMKHRLSYWKRRGIPEDKGHFPFGSKHAWDFVQGKMSFTQ-MTNFAYETHPG-EKVVGTYDMFGSPGLVIRDPDIAKLILVKD-FDNFMERKPIHYNMYDSNSKNNRYFPYMLTELRGQQWKNVRSSLTPVFTSGKLKNMIPLIHKVADNCETYL--DKNIGVEFEAKELLKGYALDIIISTGFGYENDTLNNPENIFKKHADVMIGKTFSWKLIATILLFMICPRLLRWLDWAMFDKNTVDFFAALIVKTIKERKESGQR-RNDLIDVCVDILEKERKENEKSVEDEEGAKRRNDEMEKIIIANSLIMFLAGFDTVSNASSLMMYFLAKHQDCQERLYQEVQEAIESTGSTNFDYATIMNMPYMEKFFQETLRMXSTIMNMPYMEKFFQETFRMYPLT-HLERCSKEEYKIPDTDIVIPKGIFVRYAATAVVKDEKYYPNPEVFDPENYSAEKKVDRHPFVTGAFGHGPRNCIAQRFATMEVKIVIARLLSKYKIVPCSKTVDELIPDPSSRSG--QPKGDIWVTVEKR 540
            Y  H    +K+ GIP   G  P        F+   +S+ +    F  E H    KV G YD    P L I DPD+ K +LVK+ +  F  R+P     +  ++         ++    ++WK +RS L+P FTSGKLK M+P+I +  D     L  +   G     K++   Y++D+I ST FG   D+LNNP++ F ++   ++   F      +I +F     +L  L+  +F +   +F    + +  + R E  Q+ R D + + +D    +  E+ K++ D E            ++A S+I   AG++T S+  S +MY LA H D Q++L +E+   + +     +D                      T++ M Y++    ET R++P+   LER  K++ +I    + IPKG+ V   + A+ +D KY+  PE F PE +S + K +  P++   FG GPRNCI  RFA M +K+ + R+L  +   PC +T    IP   S  G  QP+  + + VE R
Sbjct:   25 YGTHSHGLFKKLGIP---GPTPL------PFLGNILSYHKGFCMFDMECHKKYGKVWGFYDG-QQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSA---------ISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLE------------LVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYD----------------------TVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI--NGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQ---IPLKLSLGGLLQPEKPVVLKVESR 496

The following BLAST results are available for this feature:

BLAST of TCONS_00071588-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00071588-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CP3A4	6.747e-64	29.25	Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1...	[more]

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TCONS_00071588-protein (polypeptide) - C. hemisphaerica