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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00071714-protein ID=TCONS_00071714-protein|Name=TCONS_00071714-protein|organism=Clytia hemisphaerica|type=polypeptide|length=893bp
MAEKKTSGERSKGRRHKKSEINMAMFLFQASYQGNYQDLQEVLYSDKIKS
EKKFVVLNARAADGNPILINCLQGSGQVKEEKDYLECIKVLVSTGIPLDT
KDAHGKSAIHWCIILDKYEICTYLLQQGAVLESSKISPLHIAISKKSVPF
VKLLCEHKGDTMILEEKDEVGRTPLCHSLLINNSLQIFNELLIAGCDANG
QMANRKSLISHIIENDMADFLACILKKNVNLFPHGRNRYNLIHLSAIQKN
PGTLQALAQQCLIADMESPDHYGKTPLMHAVENELPENVMILLAKEVNVL
MVDNEGNTALHHANRNTSHTIVNMLVPHNPTLLQIANKAQRFPLTNAVVA
NNQVIVRALLDHGASADVRDGEGHSLIHYAAEYSSTSCLADLGSVGLTLN
SPDNHGVFPIHYSVRLDASDANTTGAKIYFLKTLVTMGADLSVADDQGLQ
PIHWAVCMGFTEAMKILLIEDADVNAITKGDQYCALHLACNCNQFECLEL
LLLQPTISIDQVDSQGRTALFTACHMKDHRFTETLLQAGANPDHQDKEGK
SPAHVAATNVSGDSLWLLSLKRANFELKNNSGETPIHLACKNADDACLRF
LLTRRCNVNTTLTNGLSTLHIAVSSKCPNKVSLLLQHGAKRNQIYYGETS
TITPLDVALENADHKCIKLLQKYGARTAHYILTQSANLIRTTWKNYHKRK
VNRGEAVPLANSSSIYTSSNASESVSTKGVYRDTRQGNQEESSITYENES
SEIMTLQGKSTTSSNKDYRYVGELPKKASSSCVEIPDYMLRVLTEEYQRE
FQEKIKKSDMEIMLMRELMKETEQLLVRAKRLNEDAENLANSQSFRNIKM
SNKKYMEEKRKLFNANNNNNKNLTRYVVVILGKNLSFIGHFQG Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 815..842 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 726..751 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 27..154
e-value: 1.17738E-10
score: 58.9342 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 99..225
e-value: 1.34759E-12
score: 64.7122 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 367..502
e-value: 4.58995E-20
score: 86.6686 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 270..392
e-value: 6.02909E-21
score: 89.365 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 510..635
e-value: 1.73814E-23
score: 96.6838 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 199..326
e-value: 7.78093E-13
score: 65.4826 |
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 372..401
e-value: 490.0
score: 7.3
coord: 405..443
e-value: 2300.0
score: 2.3
coord: 170..200
e-value: 600.0
score: 6.6
coord: 650..680
e-value: 6.2
score: 15.8
coord: 305..334
e-value: 0.33
score: 20.0
coord: 481..511
e-value: 210.0
score: 10.1
coord: 63..100
e-value: 2200.0
score: 2.5
coord: 614..643
e-value: 0.22
score: 20.6
coord: 447..476
e-value: 0.013
score: 24.7
coord: 104..133
e-value: 0.66
score: 19.0
coord: 548..577
e-value: 690.0
score: 6.2
coord: 339..368
e-value: 440.0
score: 7.7
coord: 134..163
e-value: 1.0
score: 18.4
coord: 581..610
e-value: 0.0027
score: 27.0
coord: 272..301
e-value: 1.7
score: 17.6
coord: 237..266
e-value: 2000.0
score: 2.8
coord: 515..544
e-value: 0.072
score: 22.2 |
| IPR002110 | Ankyrin repeat | PFAM | PF00023 | Ank | coord: 516..547
e-value: 0.029
score: 14.7 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 614..646
score: 8.897 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 447..479
score: 10.125 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 339..371
score: 8.977 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 515..547
score: 9.912 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 581..613
score: 9.698 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 15..147
e-value: 1.2E-14
score: 53.8 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 494..591
e-value: 5.3E-28
score: 97.5 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 567..642
e-value: 1.9E-9
score: 37.9
coord: 83..158
e-value: 1.3E-8
score: 35.2
coord: 243..328
e-value: 1.5E-9
score: 38.2
coord: 429..511
e-value: 7.5E-9
score: 36.0 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 148..215
e-value: 1.4E-8
score: 34.3 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 216..316
e-value: 5.9E-17
score: 61.1 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 423..493
e-value: 6.9E-15
score: 54.6 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 317..422
e-value: 4.5E-19
score: 68.1 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 592..872
e-value: 1.8E-18
score: 66.0 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 85..675
score: 91.392 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 431..679 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 83..418 |
Blast
BLAST of TCONS_00071714-protein vs. Swiss-Prot (Human)
Match: INVS (Inversin OS=Homo sapiens GN=INVS PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 7.941e-36 Identity = 141/557 (25.31%), Postives = 243/557 (43.63%), Query Frame = 0
Query: 159 GDTMILEEKDEVGRTPLCHSLLINNSLQIFNELLIAGCDANGQMANRKSLISHIIENDMADFLACILKKNVNLFPHGRNRYNLIHLSAIQKNPGTLQALAQQCLIADMESPDHYGKTPLMHAVENELPENVMILLAKEVNVLMVDNEGNTALH----HANRNTSHTIVNML-VPHNPTLLQIANKAQRFPLTNAVVANNQVIVRALLDH-GASADVRDGEGHSLIHYAAEYSSTSCLADLGSVGLTLNSP-DNHGVFPIHYSVRLDASDANTTGAKIYFLKTLVTMGADLSVADD---QGLQPIHWAVCMGFTEAMKILLIEDADVNAITKGDQY--CALHLACNCNQFECLELLLLQPTISIDQVDSQGRTALFTACHMKDHRFTETLLQAGANPDHQDKEGKSPAHVAATNVSGDSLWLLSLKRANFELKNNSGETPIHLACKNADDACLRFLLTRRCNVNTTLTNGLSTLHIAVSSKCPNKVSLLLQHGAKRNQIYYGETSTITPLDVALENADHKCIKLLQKYGARTAHYILTQSANLIRTTWKNYHKRKVNR 703
G++ + +++D+ GRTPL + +L + L + LL AG D N ++++ + + F+ +L + N +HL+ ++P L L + ++++ D +T L + PE+V +L+ + N+ + D EG LH H + + HT+ +L +LL + R PL AV N +V L + + D + +H+AA + L + P D+ G P+HY+ A+ F +T+ SV DD +G WA G + ++ +L +D++ I D+Y ALH A ++LLL + +D D T LF AC M +TL++ GA D D++G S H AA + D +L + N +++ +G TP+ A C+ L+ + N G + LH + ++ + + LLL A NQ+ E TPLD AL H+ I+ + ++GA + I +A I+ +K Y RK R
Sbjct: 36 GNSALKDKEDQFGRTPLMYCVLADR-LDCADALLKAGADVNKTDHSQRTALHLAAQKGNYRFMKLLLTRRANWMQKDLEEMTPLHLTTRHRSPKCLALLLKFMAPGEVDTQDKNKQTALHWSAYYNNPEHVKLLIKHDSNIGIPDVEGKIPLHWAANHKDPSAVHTVRCILDAAPTESLLNWQDYEGRTPLHFAVADGNVTVVDVLTSYESCNITSYDNLFRTPLHWAALLGHAQIVHLLLERNKSGTIPSDSQGATPLHYA------------AQSNFAETVKVFLKHPSVKDDSDLEGRTSFMWAAGKGSDDVLRTMLSLKSDID-INMADKYGGTALHAAALSGHVSTVKLLL-ENNAQVDATDVMKHTPLFRACEMGHKDVIQTLIKGGARVDLVDQDGHSLLHWAALGGNADVCQILIENKINPNVQDYAGRTPLQCAAYGGYINCMAVLMENNADPNIQDKEGRTALHWSCNNGYLDAIKLLLDFAAFPNQMENNE-ERYTPLDYALLGERHEVIQFMLEHGALSIAAIQDIAAFKIQAVYKGYKVRKAFR 576
The following BLAST results are available for this feature:
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